Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00257 ATGGCAATCCTAAAGATTACCAAAAAGCACCATAAGCGTTTCAACAATCCTTTCCCTTCTTCAGTTTCAACCACCATCCCTTACGTCCAAGGTTCTCTCTTCTTCAATTCCAAAAGAGTTCCTTCGGATCAGACCTTCTCAATTGGAAGTGATTTTCAGCTTTCTTGGACCTCCAACAATGGAGGTCACCTCTCAATTTCTCACCTTTCTCAACAAGCCAGACCCATTTGGTCTAGCATCCCTGGACAGGCTTTTGTCTCAGCTGCACTGGTTGACACGGAAGTGGAAGAAAGTAGAGGATCCTTTCTTGTCAAAGACAAAGATATTCATATGGTTTGCAATCACCAAACCATTGAGGATATTAGGATGATTGAGGATATTGGGGTGATCAATAGTCAATTTGATCATCATTTGGAATGTGAAGTGCCAGATTCTCCTTCTGTGCATCGAATGTTGGAAAAGGAAACTGATGCGCAAGAGATTCAGCTTCCTACTTTGATGATCACAGGAAGGCTTTTCAATATGACTAAAAAGAGTAAAAGGTTTCAAAAGCATGGCATTCGAGCAACTATGCAGTTTGAGGCAAAAGGACCTTCTATGTATGCAAGGTATTGGGTTTTGTTCAATCAGAAAACCAACCATGAGGTTGGGTTTCAAGTGAAGATTGAGAAACCTAACTTCGTCTCCCGCAACCAAGTCCCTAAAACAGTTTCAGGATTGTACCAGGGCTTCAAGAGGAGGCTGAGTAATAGGAAAAGGAGATTGGGTTGGTGTTGGTACCTTTCTAGACCAAGAGGGTTTGTGCTAGTCTCTTCAGTGGAGGAAGAGATAGGAGACTTGGATATCCCAAAACCAGAAGAGTTCAATAGAGTGTGGTTGACGTATGCAAGTGATGAGAGTGAGAAGTTTTATGGTTTTGGGGAGCAGTTTTCTCACATGAACTTCAAAGGAAAAAGGGTGCCCATATTTGTTCAAGAACAAGGTATTGGCAGAGGAGATCAACCCATCACCCTGGCTGCTAACTTGGTTAGTTACAGGGCAGGAGGTGATTGGAGTACAACTTATGCTCCTTCTCCATTCTACATATCGTCAAAAATGAGGTCTGTGTGCCTTGAAGGATATGATTATACTGTTTTCGATCTTACTAGACTTGACAGAGTACAGATACAGATACATGGAAACTCAGTTGAAGGGCGGATATTGCATGGAAACTCACCTTGTGAACTGATTGAACGTTTCACAGAAAGCATCGGAAGGCTACCTGAGCTTCCAGAATGGATTATATCTGGTGCTATAGTTGGAATGCAAGGTGGCACAGATGCTGTACGTCATATCTGGAATGAACTAAGGACTTACGATGTTCCTATCTCAGCATTTTGGTTGCAGGATTGGGTAGGGCAGAGAAAAACATTGATTGGTTCACAGCTCTGGTGGAATTGGGAAGTGGATTCTCAAAGGTATTGGGGATGGAAGGAACTTATTGAAGATCTTAGCTCTCAAAATATAAAAGTTATGACATATTGTAATCCCTGTCTAGCCCCGGTTGATGAGAAACAAAACAAAAGGAGAAACCTCTTTGAGGAGGCAAAACAGTTGGACATATTGGTAAAAGACAGCAATGGAAATCCATACATGGTTCCAAACACGGCTTTTGATGTAGGAATGCTAGACCTAACGCACCCAAAATCTGCAACTTGGTTCAAGCAGATTCTTGGAGACATGGTGGATGATGGAGTTAGAGGATGGATGGCTGATTTTGGTGAAGGCCTTCCTGTTGATGCTGTTCTATATTCTGGTGAAGATCCTATTTCAGCTCATAACAGATACCCAGAACTATGGGCCAAAATTAACCGAGAGATTGTGGAAGAATGGAAAAGTAACTCCTCAGACAAGGTAAAGAAAGACCAAGAAGAGAGTTTGGTTTTCTTCATGAGAGCTGGTTTTAGAGATAGTCCCAAGTGGGGGATGCTATTTTGGGAAGGAGACCAAATGGTCAGTTGGCAAACAAATGATGGAATAAAGAGTTCTGTTGTTGGCCTGCTGAGCAGTGGAATTTCTGGCTATGCCTTTAATCACAGTGACATTGGAGGATACTGTACAGTAAACTTGCCTATAGTTAAATATAATAGAAGTGAAGAATTGCTTTTGCGGTGGATGGAGCTAAATTCTTTTACCATAGTCTTCCGTACCCATGAAGGAAACAAGCCATCATGCAACAGCCAGTTTTACTCAAACCAGCAAACGATGTCACACTTTGCACGCTTTGCAAAAGTATACAAAGCATGGAAATTTTACCGAATTCAGCTGGTGAAGGAAGCTGCACAGAAAGGATTGCCTGTATGCCGCCATCTATTTCTCCATTATCCGAATGATGACCGCGTGCAACATTTGAGTTATCAGCAGTTCTTGGTTGGTTCTGAGTTCCTAGTGGTGCCTGTGCTTGACAAAGGAAAGAAGAAAGTTAAAGCTTATTTTCCGTTAGGGGAGAGTAGCAGTTGGGTCCATATCTGGACAGGAAAAATATTTTCCAGACAAGGAAGTGAAGAATGGGTAGAAGCTCCAATAGGATATCCTGCTGTATTTGTTAAGATTGGCTCTCTCATTGGAGAAACCTTTTTGAACAACCTAAGAAGTTTAGGCATTCTTTAA 2649 0.419 MAILKITKKHHKRFNNPFPSSVSTTIPYVQGSLFFNSKRVPSDQTFSIGSDFQLSWTSNNGGHLSISHLSQQARPIWSSIPGQAFVSAALVDTEVEESRGSFLVKDKDIHMVCNHQTIEDIRMIEDIGVINSQFDHHLECEVPDSPSVHRMLEKETDAQEIQLPTLMITGRLFNMTKKSKRFQKHGIRATMQFEAKGPSMYARYWVLFNQKTNHEVGFQVKIEKPNFVSRNQVPKTVSGLYQGFKRRLSNRKRRLGWCWYLSRPRGFVLVSSVEEEIGDLDIPKPEEFNRVWLTYASDESEKFYGFGEQFSHMNFKGKRVPIFVQEQGIGRGDQPITLAANLVSYRAGGDWSTTYAPSPFYISSKMRSVCLEGYDYTVFDLTRLDRVQIQIHGNSVEGRILHGNSPCELIERFTESIGRLPELPEWIISGAIVGMQGGTDAVRHIWNELRTYDVPISAFWLQDWVGQRKTLIGSQLWWNWEVDSQRYWGWKELIEDLSSQNIKVMTYCNPCLAPVDEKQNKRRNLFEEAKQLDILVKDSNGNPYMVPNTAFDVGMLDLTHPKSATWFKQILGDMVDDGVRGWMADFGEGLPVDAVLYSGEDPISAHNRYPELWAKINREIVEEWKSNSSDKVKKDQEESLVFFMRAGFRDSPKWGMLFWEGDQMVSWQTNDGIKSSVVGLLSSGISGYAFNHSDIGGYCTVNLPIVKYNRSEELLLRWMELNSFTIVFRTHEGNKPSCNSQFYSNQQTMSHFARFAKVYKAWKFYRIQLVKEAAQKGLPVCRHLFLHYPNDDRVQHLSYQQFLVGSEFLVVPVLDKGKKKVKAYFPLGESSSWVHIWTGKIFSRQGSEEWVEAPIGYPAVFVKIGSLIGETFLNNLRSLGIL* 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00257 882 CDD GH31_N 288 418 - -
Lapu1g00257 882 SUPERFAMILY (Trans)glycosidases 409 777 IPR017853 -
Lapu1g00257 882 Coils Coil 515 535 - -
Lapu1g00257 882 Gene3D Glycosidases 405 810 - -
Lapu1g00257 882 CDD GH31_glucosidase_YihQ 418 756 IPR044112 -
Lapu1g00257 882 SUPERFAMILY Galactose mutarotase-like 287 406 IPR011013 GO:0003824|GO:0005975|GO:0030246
Lapu1g00257 882 Gene3D glycosyl hydrolase (family 31) 249 402 - -
Lapu1g00257 882 Gene3D - 811 863 IPR013780 -
Lapu1g00257 882 SUPERFAMILY Glycosyl hydrolase domain 779 863 - -
Lapu1g00257 882 PANTHER SULFOQUINOVOSIDASE 1 881 - -
Lapu1g00257 882 Pfam Glycosyl hydrolases family 31 401 868 IPR000322 GO:0004553|GO:0005975
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00257 271 854 Glycoside Hydrolase AT3G45940 22.903 6.83e-21 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00257 - - var:108329550 1719.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00257 1 10329359 10334511 Lapu1g00257 1 10329359 10334511 ECH