Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00255 ATGGCGAGCACCCACATTGGGAATGCCGGAGAACCCGACGCTAAGTCCTTCAAGCCTCGCTCCAAGAAACCCTCCGACGACTTCATCACGCTCTTTCACGGCTCCGATCCGGTTCGCGTCGAGCTCACGCGCCTCCAGAACGAACTCCGAGAGAAAGATAGGGAGCTCGGGGATGCACTTGCGGAAATTAAGTCATTAAGGAATTCGGAGCGTCATAAGGAAAAGGGGGTTGAAGAGCTAACAGATGAGCTGAACAAGGTTGATGAAAAGCTAAAAGCTGCCGAAGTTCTTCTGGAAAGTAAGAACCTTGAAATAAAAAAAATCAATGAAGAGAAGAGGGCAGCACTGGCTGCACAATTTGCTGCAGAAGCCACGCTTCGAAGAGTTCATGCTGCACAGAAAGATGATGAAATGCCTCCTATTGAAGCTATTATCACACCCCTGGAGGCAGAGCTCAAGCTTGCTAGGATGGAGGTGGCAAAGCTGCAGGATGACAACAGAGCGCTTGATCGGCTGACCAAATCAAAGGAGGCTGCACTTCTTGAGGCTGAGAGAACGGTTCAGATTGCTTTGGCAAAAGCATCCTTGGTTGATGATCTGCAAAACAAAAATCAAGAGTTAACGAAACAGATTGAAATATGCCAGGAGGAGAGCAAAATCTTGGACAAAATGCTCCGGCAAAAGGTTGCTGAAGTTGAAAAACTAACCCAAACTGTTCGGGGGCTTGAAGAGGCAGTCTTGGCTGGTGGGGCTGCTGCTAATGCTGTCCGCGATTACCAGCGTAAAGTGCAAGAGATGAATGAGGAAAGGAAAATTTTAGAGCGGGAAGTAGCTCGTGCCAAAGTTACTGCAAACAGGGTTGCAACTGTAGTTGCAAATGAGTGGAAAGATGCTAATGATAAAGTAATGCCTGGTGAAATGCAACAAGTACGTGATAAATTGGCTATAGCTGAGCGCACTGCAAAAGCAGAGGCACAAATGAAGGAAAAATATCAATTGCGCTTCAAAGTTTTGGAAGAAAGGGTTAAGACATCTAATGGTAATTCCAAATTCACTGTATCAGATGGAAGAAACGTTGCCACTGGGTCTTCACGGCGACAGTCTTTTGGTGGAGCTGAGAGTCTCTCTGCATCTTCTTCCAATGGATATCTGTCGAGGAAAACCTCAATTTCAAGATCAGGGTCTTTGAGATCAAATAGTGCTAATGTGTTACTAAAACATGCCAAACTTTCATCTAGATCATTTGATGGTGGTAGTAGAAACCTGGAGAGAGAGAGGCCAACCTCAGATGCAAATGGGGTAGATAACATGCCAACAAACACCAACAATCAGACCGTCACCAGTGAGACTATTACTACACGCGAGGAGAGTGCAAATGGTATTCCAGTAAAAAAATCTAAACCAGAAAATGAAGACTGTGTTTCAGGAATGCTGTATGACATGTTGCAAAAAGAGGTTATATCTCTTAGGAAAGCTTGTAATGAAAAGGACCAGACTCTTAAAGACAAGGATGATGCAATAGAGATGTTGGCAAAGAAGGTTGATACACTGAACAAAGCTATGGAAGTTGAGGCCAGAAAAATGCGTAGGGAATTTGCTTCTATGGAGAAGGAGGTTGCTGCAATGCGAATAAACAAGGAACATGATCATAGGGCACGCCGAGCAAGTGCTCCTAGGGGGGCTGTAAATTCCCAGACAATTTCTAGCAGGTCAATTTTTTATTTATTTTTTCTTTATTGTGATACTGTTTCTTTTCTTCATTGTTTAGTATAA 1773 0.4411 MASTHIGNAGEPDAKSFKPRSKKPSDDFITLFHGSDPVRVELTRLQNELREKDRELGDALAEIKSLRNSERHKEKGVEELTDELNKVDEKLKAAEVLLESKNLEIKKINEEKRAALAAQFAAEATLRRVHAAQKDDEMPPIEAIITPLEAELKLARMEVAKLQDDNRALDRLTKSKEAALLEAERTVQIALAKASLVDDLQNKNQELTKQIEICQEESKILDKMLRQKVAEVEKLTQTVRGLEEAVLAGGAAANAVRDYQRKVQEMNEERKILEREVARAKVTANRVATVVANEWKDANDKVMPGEMQQVRDKLAIAERTAKAEAQMKEKYQLRFKVLEERVKTSNGNSKFTVSDGRNVATGSSRRQSFGGAESLSASSSNGYLSRKTSISRSGSLRSNSANVLLKHAKLSSRSFDGGSRNLERERPTSDANGVDNMPTNTNNQTVTSETITTREESANGIPVKKSKPENEDCVSGMLYDMLQKEVISLRKACNEKDQTLKDKDDAIEMLAKKVDTLNKAMEVEARKMRREFASMEKEVAAMRINKEHDHRARRASAPRGAVNSQTISSRSIFYLFFLYCDTVSFLHCLV* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00255 590 Coils Coil 500 545 - -
Lapu1g00255 590 MobiDBLite consensus disorder prediction 432 459 - -
Lapu1g00255 590 MobiDBLite consensus disorder prediction 346 396 - -
Lapu1g00255 590 MobiDBLite consensus disorder prediction 413 470 - -
Lapu1g00255 590 Pfam Microtubule-associated protein 70 26 566 IPR009768 GO:0007010|GO:0008017
Lapu1g00255 590 Coils Coil 42 69 - -
Lapu1g00255 590 MobiDBLite consensus disorder prediction 15 29 - -
Lapu1g00255 590 Coils Coil 77 118 - -
Lapu1g00255 590 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-2 23 563 IPR009768 GO:0007010|GO:0008017
Lapu1g00255 590 Coils Coil 197 217 - -
Lapu1g00255 590 Coils Coil 256 283 - -
Lapu1g00255 590 MobiDBLite consensus disorder prediction 1 30 - -
Lapu1g00255 590 Coils Coil 225 245 - -
Lapu1g00255 590 Coils Coil 145 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00255 Lapu-Chr1 10287801 10293361 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00255 - - gmx:100814485 940.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00255 1 10287801 10293361 Lapu1g00255 1 10287801 10293361 ECH