Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00250 ATGATTGGAAAAGATAGTGGTGTCATGAAGGCATGGGAGGCAACGATGAGAAAGACACATGCAGTTGCCAAGAAGCGTGCTAACAGTATATTTGGGACGATAACTTTGGCAAATGTTGCGGAAGAAGATAACCAGGATGATTATGATGACCAAGAAGAGAATGGGAACGAGGTATATGAGGTATACCTTGAAGAGAAGGTTCTACCTAATGGGGATTACTATACGGGGGAATGGGCAAATAACTTCCCACATGGGCTTGGGAAATACCTATGGACCGATGGGTGCATGTACGTTGGAGATTGGTTCAAAGGGAAAACAAAGGGAAAGGGTAGGTTCAGTTGGCCTTCAGGGGCCACATATGAAGGGGAGTTTAAGAGTGGTTTCATGGATGGGACAGGGACTTACACAGGGTGTAGTGGGGAGACTTATAAGGGGCAGTGGCAACTGAACTTGAAACATGGTCATGGTTTTAAGAGTTATGCAAATGGCGATTGGTTTGATGGAGAGTGGAAGAGGGATTTGCAAGATGGGGAGGGGAGGTATGAGTGGAAGGATGAGAGCCATTATGCGGGGGAATGGAAGAATGGGACTATTTGGGGTAAAGGGTCGTTTGTTTGGGCTAATGGGAATGTGTTTGAAGGGTTTTGGGAAGATGGTGTGCCAAAGGGGAATGGGACTTTCAAGTGGCCAGATGGAAGTTCTTATGAGGGGAATTTCAGCAAGGATGGTAAGGATCAGAATGGGACATACCATCCATGTGAGTCAGCAGAGGGGGAGGGACACAGTGAGTGGGATCCTCAAGAGTTGTATAATGAGTTGAGTGGGTATTTGGTTTGCCCTGCAGAGAAGGTTCAGGTTATGCCATCACAGAAGAGGCTTGCGGTTTGGAGGTCTACAAAGACAGGAGAGAGTGCTAAAAACAGGAGAATGTCAGTGGATGGAAGGGTAAGTATTGGCTTGGATAGATCAAGTGACAGGTTGCAAACATGGGATGGTGGAGATAGTGATGTCAGTAGTGCTAAAACTCCAACCATGGGGAGTGATGTGGAGGAAGACTTGACGACTTTACGTGTAGATGATGCTAGTGAAAATTTGGGTCAACTCCAACCTCTCAAAGTACCCAAGAAGTCAAAGAGACAGGGAGAGACCATTTGCAAAGGACACAAAAATTATGAGCTCATGCTCAATTTGCAGCTCGGAATCAGGCATTCTGTTGCAAGGCCTGCTCCCACAGCATCACTTGATCTTAAGCCTTCAGCTTTCGATCCTAAGGAGAAAGTGTGGACAAGATTTCCACCCGAAGGATCCAAATATACTCCACCACATCCATCTTGTGACTTTAAGTGGAAGGACTATTGCCCGGTAGTTTTTAGAACTCTTAGGAAGCTATTCATGGTGGATCCAGCTGATTACATGTTATCCTTATGTGGAAATGATGCCCTTCGTGAACTTTCCTCTCCTGGAAAAAGTGGCAGCTTCTTTTACTTGACCAATGACGACCGTTACATGATTAAGACAATGAAGAAAGCTGAAGTGAAAGTTCTATTGAGACTGCTTCCAGCCTATTACAATCACTTTCGAGACCACAAAAATACACTTTTGACAAAGTATTATGGCCTGCATTGTGTGAAGTTAAATGGACCTGCTCAGAAGAAGGTGCGGTTTATCATAATGGGCAACCTCTTCCGTTCTGAGTTTATCACCCATAGACGCTACGATTTGAAGGGTTCTTCACTTGGACGCACCTCAGATAAGCCTGAGACAGAAATTAGTGAAACCACCATACTTAAGGATCTTGATCTTAATTTCATATTTCAACTGGAGAAGTCCCATTTTGAAATTTTTTGCAGACAAGTTGATATGGACTGTGAGATTCTGGAACAGGAGGGAGTTATGGACTATAGTCTTCTAGTGGGCATTTATTTCAAAGATATTTCGCCAGAAGGAGAAATTATTCCTATACAATCTCGAACTCCTGTTGGTGATTTAGAAAAGGAAGGAACTCCCCATACCTCAAGTGAAGACACAGATCAACCTCCTTCTGATTCTTCTAGTTTTATATTGGGTGTGAATATGCCAGCAAGGGTTGAAAGGACGGTGAGAAGAAGTGGTTGCGAATTACAGCTTATAGGAGAACCAATTGCAGAATTCTATAATGTTGCGTTGACTTTTGGTATCATAGACATACTTCAAGACTATGACATTAGCAAGAAGCTTGAGCACGCCTACAAATCCATTCAATATGACCCAACTTCAATATCAGCCGTTGATCCTATACAATATTCAAGGCGTTTTCGTGATTTCATACTTAGAGTATTCACTGACAACTCATGA 2334 0.4344 MIGKDSGVMKAWEATMRKTHAVAKKRANSIFGTITLANVAEEDNQDDYDDQEENGNEVYEVYLEEKVLPNGDYYTGEWANNFPHGLGKYLWTDGCMYVGDWFKGKTKGKGRFSWPSGATYEGEFKSGFMDGTGTYTGCSGETYKGQWQLNLKHGHGFKSYANGDWFDGEWKRDLQDGEGRYEWKDESHYAGEWKNGTIWGKGSFVWANGNVFEGFWEDGVPKGNGTFKWPDGSSYEGNFSKDGKDQNGTYHPCESAEGEGHSEWDPQELYNELSGYLVCPAEKVQVMPSQKRLAVWRSTKTGESAKNRRMSVDGRVSIGLDRSSDRLQTWDGGDSDVSSAKTPTMGSDVEEDLTTLRVDDASENLGQLQPLKVPKKSKRQGETICKGHKNYELMLNLQLGIRHSVARPAPTASLDLKPSAFDPKEKVWTRFPPEGSKYTPPHPSCDFKWKDYCPVVFRTLRKLFMVDPADYMLSLCGNDALRELSSPGKSGSFFYLTNDDRYMIKTMKKAEVKVLLRLLPAYYNHFRDHKNTLLTKYYGLHCVKLNGPAQKKVRFIIMGNLFRSEFITHRRYDLKGSSLGRTSDKPETEISETTILKDLDLNFIFQLEKSHFEIFCRQVDMDCEILEQEGVMDYSLLVGIYFKDISPEGEIIPIQSRTPVGDLEKEGTPHTSSEDTDQPPSDSSSFILGVNMPARVERTVRRSGCELQLIGEPIAEFYNVALTFGIIDILQDYDISKKLEHAYKSIQYDPTSISAVDPIQYSRRFRDFILRVFTDNS* 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00250 777 Pfam MORN repeat 166 185 IPR003409 -
Lapu1g00250 777 Pfam MORN repeat 212 233 IPR003409 -
Lapu1g00250 777 Pfam MORN repeat 97 118 IPR003409 -
Lapu1g00250 777 Pfam MORN repeat 189 211 IPR003409 -
Lapu1g00250 777 Pfam MORN repeat 120 141 IPR003409 -
Lapu1g00250 777 Pfam MORN repeat 143 164 IPR003409 -
Lapu1g00250 777 Pfam MORN repeat 74 96 IPR003409 -
Lapu1g00250 777 SUPERFAMILY SAICAR synthase-like 386 773 - -
Lapu1g00250 777 MobiDBLite consensus disorder prediction 330 348 - -
Lapu1g00250 777 SMART PIPK_2 417 774 IPR002498 GO:0016307|GO:0046488
Lapu1g00250 777 MobiDBLite consensus disorder prediction 237 263 - -
Lapu1g00250 777 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 83 774 IPR023610 -
Lapu1g00250 777 Gene3D - 148 196 - -
Lapu1g00250 777 Gene3D - 104 147 - -
Lapu1g00250 777 Gene3D - 47 103 - -
Lapu1g00250 777 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 376 560 IPR027484 -
Lapu1g00250 777 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 161 251 - -
Lapu1g00250 777 Gene3D - 197 264 - -
Lapu1g00250 777 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 69 186 - -
Lapu1g00250 777 PIRSF PIP5K_plant 9 777 IPR017163 GO:0005524|GO:0016308
Lapu1g00250 777 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 476 770 IPR002498 GO:0016307|GO:0046488
Lapu1g00250 777 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 387 773 IPR002498 GO:0016307|GO:0046488
Lapu1g00250 777 MobiDBLite consensus disorder prediction 656 686 - -
Lapu1g00250 777 CDD PIPKc_AtPIP5K_like 390 772 - -
Lapu1g00250 777 SMART morn 141 162 IPR003409 -
Lapu1g00250 777 SMART morn 118 139 IPR003409 -
Lapu1g00250 777 SMART morn 95 116 IPR003409 -
Lapu1g00250 777 SMART morn 187 208 IPR003409 -
Lapu1g00250 777 SMART morn 164 185 IPR003409 -
Lapu1g00250 777 SMART morn 210 231 IPR003409 -
Lapu1g00250 777 SMART morn 72 93 IPR003409 -
Lapu1g00250 777 SMART morn 233 254 IPR003409 -
Lapu1g00250 777 Gene3D - 561 773 - -
Lapu1g00250 777 MobiDBLite consensus disorder prediction 325 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00250 Lapu-Chr1 10065423 10070975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00250 1 777 Acyl Lipid Metabolism Gene Families AT3G56960 63.185 0.0 1043
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00250 K00889 - gmx:100808754 1444.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00250 1 10065423 10070975 Lapu1g00250 1 10065423 10070975 ECH