Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00238 ATGTCCAGTGGATCAGTAAGACGGGTTTCCCGTCAAGATATTCAGCTGGTGCAAAATCTCATAGAACGATGCCTACAACTATATATGAGCCAGAAAGAAGTCGTGGAAACACTACTAGCTCAAGCAAAAATAGAGCCTGGTTTCACCGAACTAGTTTGGCAAAAGCTTGAAGAAGAGAATGAAGAGTTCTTCAAGGCTTATTATGCAAGATTGGTTTTGAAGCAGCAAATTTTGCAATTCAACAAATTGCTGGACCAGCAAGTCCAATTAATGCAGTTACACTCAACTGCTGTTGCATCACTGCCTACAACTAACGGGTCACATATTCCTGCAGTTTCATCACTACCTAACTCTAATGGATCACATATCCCTGCAATACCGGAGAATCCAGCATGCTACTCTGCAGACCGAACCCAAACAAGTTTGAAGCCAGAAAATATGCAACATCCTGTTGATTCCAGATTATCTAATGTGTTTAATAATGGCGGGTCATCACTACATACAAGTATGCATGCAGCAGTTGATATGTCAGCTCATGGCAATAGGATTAATGGCCCTCCGAGCATGCTTTCTGCTCAAAGCGCAAACATGGGTCTGATACAAGGAATCAATGGTGGGATGATTAAATCTGAACCTGGATATTCTGGTTGTTCTCCTTACATGTTTGGCACTGATGGAAATGTCCTGGAGGCACGTCCAGCTATTGGTGGCAGTTCAGTTACGTCATTCACTAATGTCGAGTCCAACTCACATTCTTTGAATGATGCAGTCCTAGATCCAGACACTTCTTCATTTGGATTTCTGGGGCAGATTCCCAGAAATTTTAGCCTTTCAGATCTGACAGCCGATTTTTCTCAGAGTTCTGATATACTGGAGACCTATTCCAGGTCACCCTTTCTAGCTACGGATAATGAAAACTTCCTTGACAGAGGAGAACAAGACAATAATAGGCTGGACTCCATATCAGAAGGTTTAAGTTATGAAGACTTTGGGAGTGAATAG 1002 0.4222 MSSGSVRRVSRQDIQLVQNLIERCLQLYMSQKEVVETLLAQAKIEPGFTELVWQKLEEENEEFFKAYYARLVLKQQILQFNKLLDQQVQLMQLHSTAVASLPTTNGSHIPAVSSLPNSNGSHIPAIPENPACYSADRTQTSLKPENMQHPVDSRLSNVFNNGGSSLHTSMHAAVDMSAHGNRINGPPSMLSAQSANMGLIQGINGGMIKSEPGYSGCSPYMFGTDGNVLEARPAIGGSSVTSFTNVESNSHSLNDAVLDPDTSSFGFLGQIPRNFSLSDLTADFSQSSDILETYSRSPFLATDNENFLDRGEQDNNRLDSISEGLSYEDFGSE* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00238 333 NCBIfam TIGR01589 domain 14 69 IPR006476 -
Lapu1g00238 333 MobiDBLite consensus disorder prediction 310 333 - -
Lapu1g00238 333 PANTHER OS02G0137100 PROTEIN 11 290 IPR006476 -
Lapu1g00238 333 Pfam Plant protein 1589 of unknown function (A_thal_3526) 17 69 IPR006476 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00238 Lapu-Chr1 9699789 9709296 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00238 - - gmx:100787548 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00238 1 9699789 9709296 Lapu1g00238 1 9699789 9709296 ECH