Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00236 ATGAAACCAGGGCTCGTTGCAGTGGCAACTTTGCTTGCACTCTTCGCCATCACCTTCTCCTTCTTCAACCCTCAAGCCCTGTTTTCTCCGCCCCATGTTCCGGGATCTAAGGATCACCTCCACGCTGCGCGGATACTCCACGTCTCCGGCGCCCTCGGCCCTGAAAGTTTGGCTTTTGACGCTCAAGGCGGAGGTCCGTACACCGGCGTCGCCGACGGCCGGATTTTGAAGTGGGCAGGGGAGCAGCAAGGGTGGACTGAATTTGCTTTCACCAGTTCCAATAGGTCAGATTGTGTACGTCCATTTGCACCAGAGTTGGAGCATGTTTGTGGGAGGCCTTTAGGACTAAAATTTGATAAGAAAAGTGGAGATTTGTACATTGCTGATGCTTACCTAGGCCTAAAAGTTGTGGGATCTGCAGGGGGTTTGGCCACCGAAGTGGTAACTGAAGTTGAAGGCCAGCCCTTGCACTTCACTAATGACATGGACATCAGTGAAGATGAAGATGTGATTTACTTCACCGACTCAAGCACACTCTTCCAGAGAAGGCAATTTATGCTTGTACTCCTTAGTGGAGACAGGACCGGTAGGTTAATGAAATATGACAAGTCAACAAAAGAAGTGAAGGTCTTATTACGTGACCTTGCTTTTCCTAATGGTGTTGCTTTAAGCAAAGATGGATCATTCGTTCTGGTAGCAGAAACCGCTACTTGCAGGATCTTGCAACTTTGGCTTCGTGGACCTAAGGCTGGTCAATTGGATACTTTTGCCGAATTACCCGGTTTTCCAGACAATGTTAGAAGAAATTCAGAAGGGAATTTTTGGGTAGCTCTGCATGCAAAGGGAAGCCCTTTCGCGAAGTGGGTTTCTTCCAATCCATGGGCGGGAAAGGTAATGCTAAACATTGGATTTAACTTCAAACAATTGCACTCATCGTTTGCAGGGTGGAAGCCTCATGCTGCTGCTGTAAAGCTAAGTGACAGAGGAGAGATACTAGAAGTCTTGGAAGATTGTGAAGGGAAGACCTTAAAGTTCATCAGTGAAGTGGAAGAGAAAGATGGGAAGCTTTGGATTGCATCTGTGTTGATGCCTTTCATTGGCATTTATGGTTTGTGA 1116 0.4731 MKPGLVAVATLLALFAITFSFFNPQALFSPPHVPGSKDHLHAARILHVSGALGPESLAFDAQGGGPYTGVADGRILKWAGEQQGWTEFAFTSSNRSDCVRPFAPELEHVCGRPLGLKFDKKSGDLYIADAYLGLKVVGSAGGLATEVVTEVEGQPLHFTNDMDISEDEDVIYFTDSSTLFQRRQFMLVLLSGDRTGRLMKYDKSTKEVKVLLRDLAFPNGVALSKDGSFVLVAETATCRILQLWLRGPKAGQLDTFAELPGFPDNVRRNSEGNFWVALHAKGSPFAKWVSSNPWAGKVMLNIGFNFKQLHSSFAGWKPHAAAVKLSDRGEILEVLEDCEGKTLKFISEVEEKDGKLWIASVLMPFIGIYGL* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00236 371 FunFam Protein STRICTOSIDINE SYNTHASE-LIKE 13 38 371 - -
Lapu1g00236 371 Gene3D - 37 370 IPR011042 -
Lapu1g00236 371 SUPERFAMILY Calcium-dependent phosphotriesterase 25 366 - -
Lapu1g00236 371 PANTHER STRICTOSIDINE SYNTHASE-RELATED 12 364 - -
Lapu1g00236 371 Pfam Strictosidine synthase 160 247 IPR018119 GO:0009058|GO:0016844
Lapu1g00236 371 Pfam Strictosidine synthase-like, N-terminal 38 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00236 Lapu-Chr1 9563852 9566286 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00236 - - gmx:100815025 679.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00236 1 9563852 9566286 Lapu1g00236 1 9563852 9566286 ECH