Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00229 ATGGATCATATTAGTAATGAGGCTAGAGTTGACCGTTTTCCAATTGGTCCTTCAGGCATTCTTGGTAGAACAATTGCTTTCAGGGTTTTATTTTGTAAGTCCATGTCACATTTTAAGCACCAGATATTTCACGTATTGTTAGATCTCTTCTATAGGTTTAGGGGGGGTTTGGCATCCTTTATATCATGGTTGCATCCCAGGAATCCTCAGGGGATACTGGCAATGATGACAATTGTTGCTTTCTTATTGAAAAGATATTCAAATGTGAAAGTAAGGGCTGAAATGGCATATAGGAGGAAGTTTTGGAGAAACATGATGAGATCTGCTTTGACCTATGAGGAGTGGGCTCATGCAGCTAAGATGCTTGATAAAGAGACAACAAAGATGAATGAATCAGACCTTTATGATGTGGAATTGATGAGGAACAAGCTTCAAGAGCTCCGCCACCGTCGGCAAGAGGGGTCTCTTAGAGATATAATATTTTGTATGCGTGCTGATCTTGTAAGAAATTTAGGTAATATGTGTAATCCTGAACTACACAAGGGTAGGCTTCAGGTGCCCAAATTAATCAAGGAATACATTGATGAAGTAACGACTCAATTGAGAATGGTCTGTGATTCTGATTCAGAGGAGTTATCGTTGGAAGAAAGGCTTGCTTTCATGCATGAAACTAGGCATGCATTTGGGAGGACAGCTTTGCTGTTAAGTGGGGGTGCTTCTCTTGGAGCTTCTCATGTTGGTGTAGTTAAAACACTGGTAGAACATAAACTCTTGCCTAGGATAATTGCTGGTTCAAGTGTGGGATCCATTATGTGTGCCGTTGTTGCCACTAGGACTTGGCCTGAGCTTCAGAGCTTTTTTGAAGATTCATGGCACTCATTACAATTTTTTGATCAAATGGGTGGGATTTTTACAGTTGTCAAGAGAGTCACGACATTTGGTGCTGTTCATGAGATCAGACAGTTGCAAATGATGTTGAGGCATTTAACAAGCAACCTTACATTTCAAGAAGCTTATGACATGACAGGTAGAATTCTTGGGATTACAGTTTGTTCCCCGAGGAAGCACGAACCACCTAGATGTCTTAACTACTTGACTTCACCCCATGTGGTTATATGGAGTGCAGTCACTGCTTCTTGTGCCTTTCCTGGCCTTTTTGAGGCTCAAGAATTGATGGCAAAGGACAGAAGTGGGGAAATTATTCCTTACCATCCTCCTTTTAACTTAGGTCCTGAAGAAGGCTCCACACCAGCTCGCCGTTGGAGGGATGGTAGCTTGGAGATTGATTTACCTATGATGCAGTTGAAAGAACTATTCAATGTAAATCATTTTATAGTTAGCCAGGCCAACCCTCATATTGCACCATTATTGAGATTGAAAGAATTCGTGCGGACTTACGGGGGCAACTTTGCTGCCAAGCTTGCTCATCTTGTGGAGATGGAGGTGAAACATAGGTGTAATCAAATACTGGAACTTGGTTTTCCATTAGGTGGACTTGCTAAGTTGTTTGCTCAAGACTGGGAAGGTGATGTGACTGTTGTTATGCCTGCAACTCTTGCTCAGTACACCAAAATTATACAGAACCCTTCTTATGGAGAGCTTCAAAAGGCGGCGAACCAAGGGAGAAGATGTACCTGGGAGAAACTTTCAGCCATTAAAGCAAATTGTGGCATTGAGCTTGCTCTTGATGAGTGTGTTGTGATTCTCAATCATATGAGAAGACTGAAGAGAATTGCTGAGAGAGCTGCTTCTGCTTCTCATGGTTTGTCCAGCACTGTCAGGTTCAGTGCTTCAAGAAGAATTCCTTCATGGAATTGCATTGCACGAGAGAATTCGACCGGCTCCCTTGAGGACCTTATTGATGTTGCTTCCTCATTGCATCAAAGCATTAGCAGTTCTAATGTAGCCAGTGGTAAAACTTGGAAGACTCACCGTGGCATACATGAAGGAAGTGACAGTGACTCTGAAAGTGTTGATTTGAACTCTTGGACAAGATCTGGTGGGCCTTTGATGAGAACTACTTCGGCAAATATGTTCATTGATTTTCTCCAAAACTTGGAAGTTGATACTGAACCAAATAAAGGCTTAGTGAGTCATGCTAGCCCTAATGATTTTCAGTATCGTAGCCCCAGGCTCACAACACTGGATAGGAACTCCGATAGCGCAGAATTTGAGCAAAGGGAAATTGGCAACAGGGTTGTCAATGGGTCCAGCATACTGGTGACTGCAGGTGATTTTTTGCAGCCTGAAAGGATCCATAACGGTATTGTGTTTAATGTTGTCAAGAAAGAAGACGTGACACCCTCAAACAGGAGTCATGATTTTGAAAATTACAACAGTGAGGTTGCTGAATGTGTTCAAGATGAGTGTCCAGGGAAGGAGATGGATGCTTCTAGCTCAGCTTCTGAACATGGAGATGATGAATCCACACCAGCTACGTCCCTAACTGTATCTCCAGATTATACTTCTGTGGATCGTCATTCGGGCACAGATTCAAGTATGGATCAGAGCATTGTTGATGGCTAG 2526 0.4252 MDHISNEARVDRFPIGPSGILGRTIAFRVLFCKSMSHFKHQIFHVLLDLFYRFRGGLASFISWLHPRNPQGILAMMTIVAFLLKRYSNVKVRAEMAYRRKFWRNMMRSALTYEEWAHAAKMLDKETTKMNESDLYDVELMRNKLQELRHRRQEGSLRDIIFCMRADLVRNLGNMCNPELHKGRLQVPKLIKEYIDEVTTQLRMVCDSDSEELSLEERLAFMHETRHAFGRTALLLSGGASLGASHVGVVKTLVEHKLLPRIIAGSSVGSIMCAVVATRTWPELQSFFEDSWHSLQFFDQMGGIFTVVKRVTTFGAVHEIRQLQMMLRHLTSNLTFQEAYDMTGRILGITVCSPRKHEPPRCLNYLTSPHVVIWSAVTASCAFPGLFEAQELMAKDRSGEIIPYHPPFNLGPEEGSTPARRWRDGSLEIDLPMMQLKELFNVNHFIVSQANPHIAPLLRLKEFVRTYGGNFAAKLAHLVEMEVKHRCNQILELGFPLGGLAKLFAQDWEGDVTVVMPATLAQYTKIIQNPSYGELQKAANQGRRCTWEKLSAIKANCGIELALDECVVILNHMRRLKRIAERAASASHGLSSTVRFSASRRIPSWNCIARENSTGSLEDLIDVASSLHQSISSSNVASGKTWKTHRGIHEGSDSDSESVDLNSWTRSGGPLMRTTSANMFIDFLQNLEVDTEPNKGLVSHASPNDFQYRSPRLTTLDRNSDSAEFEQREIGNRVVNGSSILVTAGDFLQPERIHNGIVFNVVKKEDVTPSNRSHDFENYNSEVAECVQDECPGKEMDASSSASEHGDDESTPATSLTVSPDYTSVDRHSGTDSSMDQSIVDG* 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00229 841 Pfam Patatin-like phospholipase 233 424 IPR002641 GO:0006629
Lapu1g00229 841 Gene3D Cytosolic phospholipase A2 catalytic domain 229 309 - -
Lapu1g00229 841 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 233 436 IPR002641 GO:0006629
Lapu1g00229 841 MobiDBLite consensus disorder prediction 804 841 - -
Lapu1g00229 841 Gene3D Cytosolic phospholipase A2 catalytic domain 310 494 - -
Lapu1g00229 841 MobiDBLite consensus disorder prediction 788 841 - -
Lapu1g00229 841 CDD Pat_SDP1-like 163 570 - -
Lapu1g00229 841 Pfam Domain of unknown function (DUF3336) 95 226 IPR021771 GO:0004806|GO:0006629
Lapu1g00229 841 PANTHER NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER 34 571 - -
Lapu1g00229 841 SUPERFAMILY FabD/lysophospholipase-like 229 575 IPR016035 -
Lapu1g00229 841 MobiDBLite consensus disorder prediction 641 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00229 Lapu-Chr1 9146561 9152321 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00229 4 799 Acyl Lipid Metabolism Gene Families AT5G04040 73.892 0.0 1214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00229 K14674 - gmx:100791261 1558.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00229 1 9146561 9152321 Lapu1g00229 1 9146561 9152321 ECH