Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00228 ATGAAGGTTGAGATTGAAGGCAGCCAGAGTGACTGTACTGAATCTCAGGGAGTGTCTGGAACAGATGAATCTGTTTCCAGCCGACCAGAAAATAGAAGATTGGAATCCAAGAAGAAACTGAAGAAAGTGAGGTCAATTAGGCTTGTAAGATTGCCAAGCAAGAGATCATCCACTAGAGGGAGACCCCAATATGATCATCTCTCCATTCTCTCATCAGTTAGCACTGAAAGTTTAGAGGGGCCAACACCACTTGATATGGCTGATGCATCACCCAATTACATGAAGGGTACCAGCAGTTCTCATGCAAAGGATAGTGTTCAGAGTACACAAACACTATTATTCACAAAGAAGACTTTGGCACGAATGTCTACTTTGAAACTGAAGAGGAGTCTGACCAGAAAGGTATCTGGTAGGACTGAACCAAAGAGGAAACTGAAGTCCTCTAGATCAATCAAGCTTGTAACTGTCAAGGGCCAAAAGTCAACAAGAAATTCATCTGAATCTAGTTATGGAAGTGGTGATCAGAATTGGAGAAGTGCAAGTGATGCTGATAACAAAACCCAGAGAGTCATCACCAGAAGATTAAGCTTGAAGCCTGTGAGGATCTTAGCAAAGATTCCCACTTTCAAATCAAAGAATTCTTCCATGGAGAGGGGCCATCAGATATCTCAATCCCCAGACACAAGCTTGCTTAGAGCCACTTGCTCTTCTGCTCTGAAGGATTCCCATTTTCCTGACCTCATTGACATCCCTCAAGAGGAAAGTGACTCTCAAGGAGTATCAGCTGTTGTGAAGGTTTGTCCATATTCTTACTGCTCACTTCATGGTCACCGCCATGGGAATCTGCCTCCACTGAAGCGCTTTGTGTCAATGAGGAGGCGCACGTTGAAGAGCCAAAAGCCAGCAAAAACGGATCATCAATCTGTTACTAGATCAAATCAGTTTGGTAATGAAAAGAAAGCTACTCAGAAAAGTCAAACTGTCCACAGTGAAGGTGGCATATCTCATTTTCAGAACAAGAAAAAGCTGGCAAGGGACTCATGTATTAGGCCTCATGACACTCTAGAATCCACAGATACTGAAAGTGTTGAATCAACATCAACAGACGGGGTCCAGTTTTCTGCTCCTCATATTGAGATGTTGGAGGGAGAAGTAACCAACAGAGGCAAAAATATGGAGCCAGATCATGAAGTACTGGAGGTGAGTTCTGTACAGAAAGAGTCTACACGTGCCAGCATTACTGATACGGCATGTGGAATGCAGGAAAGAGATAAAAAGTATATCAGCATGTGGCAGTTGGTGTACAAGCATGCTGTATTAAGTGACACAGGGAAATGTGAAAACAAGCAGCTCTTTGATGGGAGGGACAAGGAAGGAAAAGTGCAAGATTTCCTTGCAAGTAATGAAGTAAACAACTCTAATTGTCGTGATGAGTGTGATACAGATCAGAATATGGATGATGAAAATAAGAATGTAATTGAGCTGGTGCAGAAAGCCTTTGATGAAATTCTTCTCCCAGAACCTGAAGACCTCTTTTCTGATGATAATTCCAAATCTGAAGGCATTGATTCAGATGAGACACTCTTAGAAAAAGGTGAAGGCCAGAGAGAATGGAAAACCTCAGAATCCACAGAATCTCCAATATCACAGAGGACAGGGACCAAATCTGACCAAAGAGCACCGAAAAGCTGGAGCAATCTGAAAAAGTTAATCCTCTGGAAAAGGTTTGTAAAGGCATTAGAGAAGGTAAGAAATATCCACCCCCATAGACCAAGACGTTTTCCATCTGATGCTAACTTTGAAATGGAAAAAGTTTTTCTCAAGCACCAAACAGCAGAAGAGAAAAAGCATGCTGAGGAATGGATGCTTGACTATGCACTTCAAAAGGTTATTTCTAAACTTGCACCTGCTCAAAGACGAAGAGTGACACTTTTAGTAGAAGCTTTTGAAACAGTTCAGCCATTTCAAGATGTTGAAAATAGTCTACGGTTTTCTGCAACAACGGAGCCTCAATCATATCCCGTTCAATCCCTTGAGAATTCCTCAACTTGTAGCAAGGAAGAAGCATCACTTCCGCATAACAGTACCATGGAACTGGCAGTTAGTACTGGTGATGATCCAATGATAGAACCGCACAATCCTACTATGCTTAAAGAGATACGTCTTAACAATCCTGAGATCAAGACAGCCAATAATATGACTGCATTTGGTGATATTGCAGAAGACTTAAATGGAAAGCAATGTTTAGCCAGCAGTTATGATAGTGAGAAGTTATCAAGTGACAATGATAATATTTTTCTTGGAGAGATCAAAGATACCAGGTCAAGTTCCTTAAATAAGCCAGCTGAATTTACAAGAAGCCATGTGGAGGATTCAACCAATGCAGTAAGCAATGATGTTTCAGAAGACTTGCTATCCAGTTTGAGTATAGAAAATCAACATATCAAATCTGAGTCACCTGGAAGAGATGCTGAAACCAAGAATTTGATTGGTGATAATGGGGAAAAGCTTTCCATGTCTAAAAGTTTAATCGTAGAAGGTCTAGTTAGATCACTCAGATCTAACCTGATTGGTTCAGGAGCACCCGCAAACCTATTGGATGAATCAACAGATGACGGAAAAGAAGGAACTGCAAAAGTTAAGTTGGAAACTGAGACTATTGAAGAGTTCCCTACAAAGGAACAATGTAAAGCTCCTATGAGTGCTGTTGTAGAACCTGAGACCCCTGTGGAGAAACAGAACAACACAGGATTGTGGTACTTGGTGTATAAACACATGGTATCAAATATGGCAGAAAACAATTCCAAGTCACTGATTGATGGGGAAGATGAGAAAAAGTCAGCATTCGATGACAGTAGAACACGAGGATCTTCCATCTCTTATGAAGGTACACCTGTGAGTGATCAAGAGATGCAACTCAAGGACCAGGCTGTAGCTGATCCAGAAGTTGCACTTCGACAGATTGAAGCCATCAAGATGGTAGAAGAAGCAATTGATTCAATTCTTCCAGATGATCAAGATGACTTAGCAGACAAGGAGTCACTCACTGGCAACACAATATCTAACAACTCCAAACTATCTGACAGAACTGAAAGAGTGTACACTGAAGGCCTGAACCAAAAAGAAGAAAAGATGGAATCTGGGAATGAAATAATCAAGGAACAACAAGAAGAATCAACACCAAAGGAACAAAGCAAAACAAACCAGCCATTGTCTAGAAGCTGGAGCAATCTTAAAAAAGTGATCCTGCTTAGGAGATTCATCAAGTCATTGGAAAAAGTAAGGAAATTCAATCCAAGAGGACCCAGATATCTACCTCTAGAGCCTGATTCAGAAGCTGAAAAGGTTAACTTAAGGCATCAAGACATGGAAGAAAGAAAAGGCACTGAAGAATGGATGCTTGATTATGCACTTCGACAGGTTGTTTCCAAATTAACCCCGGCTAGGAAAAGGAAAGTGGAGTTGCTAGTGGACGCTTTTGAAACAGTAATGCCAACCATAAAAAATTGA 3510 0.4111 MKVEIEGSQSDCTESQGVSGTDESVSSRPENRRLESKKKLKKVRSIRLVRLPSKRSSTRGRPQYDHLSILSSVSTESLEGPTPLDMADASPNYMKGTSSSHAKDSVQSTQTLLFTKKTLARMSTLKLKRSLTRKVSGRTEPKRKLKSSRSIKLVTVKGQKSTRNSSESSYGSGDQNWRSASDADNKTQRVITRRLSLKPVRILAKIPTFKSKNSSMERGHQISQSPDTSLLRATCSSALKDSHFPDLIDIPQEESDSQGVSAVVKVCPYSYCSLHGHRHGNLPPLKRFVSMRRRTLKSQKPAKTDHQSVTRSNQFGNEKKATQKSQTVHSEGGISHFQNKKKLARDSCIRPHDTLESTDTESVESTSTDGVQFSAPHIEMLEGEVTNRGKNMEPDHEVLEVSSVQKESTRASITDTACGMQERDKKYISMWQLVYKHAVLSDTGKCENKQLFDGRDKEGKVQDFLASNEVNNSNCRDECDTDQNMDDENKNVIELVQKAFDEILLPEPEDLFSDDNSKSEGIDSDETLLEKGEGQREWKTSESTESPISQRTGTKSDQRAPKSWSNLKKLILWKRFVKALEKVRNIHPHRPRRFPSDANFEMEKVFLKHQTAEEKKHAEEWMLDYALQKVISKLAPAQRRRVTLLVEAFETVQPFQDVENSLRFSATTEPQSYPVQSLENSSTCSKEEASLPHNSTMELAVSTGDDPMIEPHNPTMLKEIRLNNPEIKTANNMTAFGDIAEDLNGKQCLASSYDSEKLSSDNDNIFLGEIKDTRSSSLNKPAEFTRSHVEDSTNAVSNDVSEDLLSSLSIENQHIKSESPGRDAETKNLIGDNGEKLSMSKSLIVEGLVRSLRSNLIGSGAPANLLDESTDDGKEGTAKVKLETETIEEFPTKEQCKAPMSAVVEPETPVEKQNNTGLWYLVYKHMVSNMAENNSKSLIDGEDEKKSAFDDSRTRGSSISYEGTPVSDQEMQLKDQAVADPEVALRQIEAIKMVEEAIDSILPDDQDDLADKESLTGNTISNNSKLSDRTERVYTEGLNQKEEKMESGNEIIKEQQEESTPKEQSKTNQPLSRSWSNLKKVILLRRFIKSLEKVRKFNPRGPRYLPLEPDSEAEKVNLRHQDMEERKGTEEWMLDYALRQVVSKLTPARKRKVELLVDAFETVMPTIKN* 1170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00228 1169 MobiDBLite consensus disorder prediction 56 79 - -
Lapu1g00228 1169 Coils Coil 1038 1058 - -
Lapu1g00228 1169 MobiDBLite consensus disorder prediction 297 371 - -
Lapu1g00228 1169 MobiDBLite consensus disorder prediction 133 147 - -
Lapu1g00228 1169 SMART CaM_binding_2 1040 1165 IPR012417 GO:0005516
Lapu1g00228 1169 SMART CaM_binding_2 540 654 IPR012417 GO:0005516
Lapu1g00228 1169 MobiDBLite consensus disorder prediction 152 185 - -
Lapu1g00228 1169 MobiDBLite consensus disorder prediction 1009 1072 - -
Lapu1g00228 1169 MobiDBLite consensus disorder prediction 302 334 - -
Lapu1g00228 1169 Pfam Plant calmodulin-binding domain 1060 1165 IPR012417 GO:0005516
Lapu1g00228 1169 Pfam Plant calmodulin-binding domain 551 653 IPR012417 GO:0005516
Lapu1g00228 1169 MobiDBLite consensus disorder prediction 8 25 - -
Lapu1g00228 1169 MobiDBLite consensus disorder prediction 129 185 - -
Lapu1g00228 1169 MobiDBLite consensus disorder prediction 511 540 - -
Lapu1g00228 1169 MobiDBLite consensus disorder prediction 1029 1061 - -
Lapu1g00228 1169 MobiDBLite consensus disorder prediction 812 833 - -
Lapu1g00228 1169 MobiDBLite consensus disorder prediction 1013 1028 - -
Lapu1g00228 1169 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 13 654 IPR044681 GO:0005516
Lapu1g00228 1169 MobiDBLite consensus disorder prediction 541 562 - -
Lapu1g00228 1169 MobiDBLite consensus disorder prediction 335 359 - -
Lapu1g00228 1169 MobiDBLite consensus disorder prediction 1 104 - -
Lapu1g00228 1169 MobiDBLite consensus disorder prediction 509 562 - -
Lapu1g00228 1169 MobiDBLite consensus disorder prediction 935 966 - -
Lapu1g00228 1169 MobiDBLite consensus disorder prediction 816 830 - -
Lapu1g00228 1169 MobiDBLite consensus disorder prediction 937 952 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00228 Lapu-Chr1 9112698 9117596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00228 430 658 Calmodulin-binding Proteins AT5G04020 36.364 1.29e-24 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00228 - - gmx:100804484 1666.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00228 1 9112698 9117596 Lapu1g00228 1 9112698 9117596 ECH