Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00227 ATGGCTCAATTGCTATCATCCTCTTACTCCTTGACTATCTGCTCTAGAAATAAACCTTACTTAAAACCTTTTAAGCAATGCTCAACACCATTTTCTATTGCGGTTACTTGCAATAATTCTAAACCTTCATCTAGAGGGCTTTTCTTGCAAGAACACAAGCTAAGAAAAGGTTCTCTAGTAGTACACGCTGCTGCAGTTTCAACTAGCCAGGAAACCCCAGTTCAAACTAGCTCTGGTGATCCTTTTAAACCACAGAGAGTCATGGTCATTGGTGGAGATGGATACTGTGGTTGGGCAACTGCCCTCCACCTTTCTAACAAGGGTTATGAGGTTGCCATTGTTGACAACCTTGTGCGACGCCTTTTTGATCACCAACTTGGACTGGAGTCTCTAACACCAATTTCCTCCATTCAGAATCGTCTTCATTGTTGGAAATCACTCACTGGAAAAAGTATTGAGCTCTACATTGGAGACATATGTGATTTTGAGTTCTTATCTGAAACCTTCAAGACATTTGAACCTGATGCTGTTGTCCACTTTGGAGAACAGCGGTCTGCACCTTACTCTATGATAGATCGGTCAAGAGCTGTGTATACCCAGCAAAATAATGTTATTGGTACATTGAATGTGCTCTTTGCCATAAAAGAGTTCAGAGAGCAGTGTCATCTAGTTAAGCTTGGGACCATGGGTGAATATGGAACCCCAAATATTGATATTGAGGAAGGTTATATTACCATTACTCACAATGGAAGGACAGACACTTTGCCATATCCCAAGCAAGCTAGCTCATTCTATCATCTAAGCAAGGTACATGATTCACATAACATAGCTTTCACTTGCAAAGCTTGGGGTATTCGAGCTACTGACTTGAACCAAGGAGTGGTATATGGGGTAAGGACAGATGAGACTGCACTGCATGAAGAGCTGTATAACAGGCTTGATTACGATGGAATATTTGGAACTGCATTGAATCGGTTCTGTGTTCAGGCTGCTGTTGGTCATCCACTGACTGTCTATGGTAAAGGAGGCCAGACTAGGGGCTTCCTTGACATAAGAGATACAGTTCAATGTGTTGAGCTTGCCATTGCAAACCCTGCGAAGCCGGGGGAATTCCGAGTCTTCAACCAATTCACTGAGCAGTTTTCAGTCAATCAGCTTGCCAACCTTGTTACCGTAGCTGGTGAGAAGCTGGGCCTTGATGTGAAAACTATCAATGTGCCTAACCCAAGAGTTGAGGCAGAAGAGCATTACTACAATTGCAAGAACACTAAACTTGTTGAGCTAGGACTGAGACCACACCTTCTTTCAGATTCTCTCCTTGATTCACTGCTCAACTTTGCTGTTCAGTACAAGGACCGTGTTGACACAAAACAAATTATGCCTAGTGTATCTTGGAAAAAAGTTGGGGTCAAAACAAAAACCATTACAGCCTAA 1434 0.4254 MAQLLSSSYSLTICSRNKPYLKPFKQCSTPFSIAVTCNNSKPSSRGLFLQEHKLRKGSLVVHAAAVSTSQETPVQTSSGDPFKPQRVMVIGGDGYCGWATALHLSNKGYEVAIVDNLVRRLFDHQLGLESLTPISSIQNRLHCWKSLTGKSIELYIGDICDFEFLSETFKTFEPDAVVHFGEQRSAPYSMIDRSRAVYTQQNNVIGTLNVLFAIKEFREQCHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETALHEELYNRLDYDGIFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVQCVELAIANPAKPGEFRVFNQFTEQFSVNQLANLVTVAGEKLGLDVKTINVPNPRVEAEEHYYNCKNTKLVELGLRPHLLSDSLLDSLLNFAVQYKDRVDTKQIMPSVSWKKVGVKTKTITA* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00227 477 CDD SQD1_like_SDR_e 86 466 - -
Lapu1g00227 477 Gene3D - 293 454 - -
Lapu1g00227 477 Pfam NAD dependent epimerase/dehydratase family 87 374 IPR001509 -
Lapu1g00227 477 Gene3D - 86 377 - -
Lapu1g00227 477 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 85 455 IPR036291 -
Lapu1g00227 477 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 83 465 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00227 1 476 Acyl Lipid Metabolism Gene Families AT4G33030 79.375 0.0 755
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00227 K06118 - gmx:100816616 892.108