Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00224 ATGGAATCTGAGACTGAATTGAAGCTTCCAATTATTGACTTCTCCATTGAAGGCTTGGAATCCAATGTTGCAGAGTGGGAGTCAGTGAAATCCCAAGTTCACAAAGCACTTGTAGAGTATGGTTGCTTTGAGGCTGTGTTTGATAAAGTCCCTTTGGATTTTCGAAAAGCCATGTTTCTTGAAGTGGACGAGTTATTCAATCTCCCTTTAGAAACCAAGAAACTGGCTGTGTCTGGTAGGCCATACCGTGGTTATGTTGGCCATTTTCAACTCCATGAGAGCATGGGAATTGAAGATGCTGATGTTCATGAGAAAGTGGAAAGTTTGATCAACATCTTATGGCCACAAGGAAAATCAAGTTTTAGCAAAAATCTGCAATTCTTCACCCAGAAAGTGTCAAGGTTGGATCAGATGATTAGGAAGATGTGTTTGGAGAGTTTAGGAGTTGAAAAGTATTTGGATGAGCACATGAACTCAACTAGTTACCTTGCACGGCTTATCAAGTACCAAGGCCCTCAAACTAATGAACCAAAAGTTGCCATAGCAGAGCACACAGATAAGAACATATTGACCATACTATGTCAAAATCAAATTGATGGTTTAGAGATACAGACCAAAAATGGAGAGTGGATCAAATACAAGCCCTCAACATCAAACAGTTTCGTTGTTATCACTGGCGACACATTTTATGCATGGACTAATGGGAGGGTGCATACACCGATTCACAGAGTGATGATGAGTGGAAATGAAACAAGGTTCACTATTGGATTGTTCACAGTTCCAAAAACAGGGTTCATAATAAAGGCCCCAGATGAGCTTGTGACAGAGGAGCACCCTTTGCTTTTCAAGCCCTTTGTCCAGAGTGAGTTCATTAAGTTTCTTCACTCTTCTGAGAATATAAAAAATGCATTGAAGGTTTATTGTGGAGTTTGA 933 0.4019 MESETELKLPIIDFSIEGLESNVAEWESVKSQVHKALVEYGCFEAVFDKVPLDFRKAMFLEVDELFNLPLETKKLAVSGRPYRGYVGHFQLHESMGIEDADVHEKVESLINILWPQGKSSFSKNLQFFTQKVSRLDQMIRKMCLESLGVEKYLDEHMNSTSYLARLIKYQGPQTNEPKVAIAEHTDKNILTILCQNQIDGLEIQTKNGEWIKYKPSTSNSFVVITGDTFYAWTNGRVHTPIHRVMMSGNETRFTIGLFTVPKTGFIIKAPDELVTEEHPLLFKPFVQSEFIKFLHSSENIKNALKVYCGV* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00224 310 SUPERFAMILY Clavaminate synthase-like 6 295 - -
Lapu1g00224 310 Pfam 2OG-Fe(II) oxygenase superfamily 168 259 IPR044861 -
Lapu1g00224 310 Gene3D - 1 293 IPR027443 -
Lapu1g00224 310 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 9 290 - -
Lapu1g00224 310 FunFam Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 2 299 - -
Lapu1g00224 310 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 160 261 IPR005123 -
Lapu1g00224 310 Pfam non-haem dioxygenase in morphine synthesis N-terminal 9 104 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00224 Lapu-Chr1 9018708 9019963 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00224 128 290 Glycosyltransferase AT5G59530 24.405 2.25e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00224 - - gmx:100817152 530.406