Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00220 ATGGCTATGTTGTTGTCTACAATTGTTGTTCCTTCTACCAAGCTTGTCATCTTCAACAACAATACACAAGAGCGTGCACTTCCAAGTTTTCGTCATTTTTCCGATACTAGCAAGCGCTTTGAGAAAGTGTCGTCCTTGATTGCTTTTGAGGTGAAGGGTGACTCCACTCACGCCAAAGCCACAAGGAGAGGTAGTAGAAACCCATTGTTGAGTGAGGGGAGAGATGAAGATGAAGCCAGAGGACCCGTTTGTCCTGGTTGTGGAGTCTTCATGCAAGATAAGGACCCTAACCTTCTAGGGTATTACCAACCAAGGAAGGTGAAAGTGGAAGAGCTTTCCGAAGAGGATGATGCTGTGTTTGATGATGATGGTGGTGGTGATTACGCTGAAGAAGAAGAAGATGATGACGAAGTGGGTTTTTTGAATGAAAGTGAAATTACGCTTGGAGAAGAGAGTGAGGGGTTAACAGATGAGGTTGACTGGGAAGCTAAGTTACTGGGTGAAGATGATGAGAAGTTGGAATTGGATGGGTTTGCACCTGCAGGAGTTGGATATGGTAACATTACTGAGGAGTACTTGGAAAAGATAAAAAGGAAGAAGGTGTCCAAAGCTGAGAAGAAGAGGATGGCTAAGGAGGCTAACAGGGAGAAAGAAGAGGTTACTGTGTGTGCTCGGTGTCATTCCTTGAGATACTATGGCCACGTGAAGAACCAGACGGCGGAGAATTTGATACCGGATTTTGATTTCGATAGGTTGATTTCTACGAGGCTGATGAACCCTTCTGGAAGTGGCAGTGCTACTGTTGTTGTCATGGTTGTGGACTGTGTTGATTTTGATGGTTCATTCCCGAGAATTGCGGTGAAATCCTTGTTTCAAGCATTGGAAAGAGTACAGGACAACTCGAAGCGGGCCAAGAAGCTGCCCAAGCTTGTTCTTGTGGCTACAAAGGTTGATCTCCTTCCCTCCCAGGTTTCTCCTACGAGGTTAGATAGATGGGTTCGAAATCGTGCAAGATCTGGAGGAGCGCCTAAGCTAAATGGGGTTTATTTGGTCAGTTCAAGGAAGGATTTAGGTGTAAGGAATTTGTTATCCTTCGTGAAGGATTTGGCTGGTCCTCGTGGGAATGTGTGGGTGATTGGGGCTCAAAATGCAGGGAAGTCTACCCTGATCAATGCGTTTTCAAAGAAACAAGGAGCTAAAGTTACAAAGCTGACGGAAGCTCCAATTCCTGGGACAACACTTGGGATCTTGAGAATTGCTGGAGTTTTGCCAGCTAAGACTAAGATGTTTGACACTCCGGGGCTCTTGCATCCATATTTAATGTCAATGAGATTGAATCGGGATGAGCAAAAGATGGTTGAGATCCGCAAGGAACTCCAGCCTCGATCATATAGAATTAAGGCAAGACAAGCTATACACATTGGTGGGTTGACAAGACTTGACCTTGTTGGAGCCTCTGTTGAAACAATATATGTCACAGTTTGGGCATCACCAAATGTTTCTCTTCACATGGGGAAAATTGAAAATGCTGATGAGGTTTGGAGAAAACATGTCGGTATCAGGTTACAGCCTCCCGCTGGTAATGACCGTGCTGCTGAATTAGGAACGTGGCAAGAAAGAGAAGTAAAAGTGTCTGGAAGTAGTTGGGATGTGAACAGCATTGACATAGCAATAGCGGGTTTAGGTTGGTTCTCACTGGGTCTCAAAGGCGAAGCAACCACGAAATTGTGGGCCTTTGATGGGGTTGAAGTAACTTTGAGAGAGCCTTTGGTGCTTGACCGGGCACCATTCCTTGAGAAGCCAGGATTTTGGTTACCTAAAGCCATCTCTGATGCTATTGGCAACCAAACCAGACTTCAAGCTCAAAGAACGAAACAACTTGACAATGAGGATACGGAATACGTGGGGGCAGGGACAGGGTTATCTGCATGA 1932 0.4545 MAMLLSTIVVPSTKLVIFNNNTQERALPSFRHFSDTSKRFEKVSSLIAFEVKGDSTHAKATRRGSRNPLLSEGRDEDEARGPVCPGCGVFMQDKDPNLLGYYQPRKVKVEELSEEDDAVFDDDGGGDYAEEEEDDDEVGFLNESEITLGEESEGLTDEVDWEAKLLGEDDEKLELDGFAPAGVGYGNITEEYLEKIKRKKVSKAEKKRMAKEANREKEEVTVCARCHSLRYYGHVKNQTAENLIPDFDFDRLISTRLMNPSGSGSATVVVMVVDCVDFDGSFPRIAVKSLFQALERVQDNSKRAKKLPKLVLVATKVDLLPSQVSPTRLDRWVRNRARSGGAPKLNGVYLVSSRKDLGVRNLLSFVKDLAGPRGNVWVIGAQNAGKSTLINAFSKKQGAKVTKLTEAPIPGTTLGILRIAGVLPAKTKMFDTPGLLHPYLMSMRLNRDEQKMVEIRKELQPRSYRIKARQAIHIGGLTRLDLVGASVETIYVTVWASPNVSLHMGKIENADEVWRKHVGIRLQPPAGNDRAAELGTWQEREVKVSGSSWDVNSIDIAIAGLGWFSLGLKGEATTKLWAFDGVEVTLREPLVLDRAPFLEKPGFWLPKAISDAIGNQTRLQAQRTKQLDNEDTEYVGAGTGLSA* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00220 643 Gene3D - 262 438 IPR027417 -
Lapu1g00220 643 Pfam 50S ribosome-binding GTPase 376 450 IPR006073 GO:0005525
Lapu1g00220 643 CDD YqeH 223 435 - -
Lapu1g00220 643 PANTHER GENETIC INTERACTOR OF PROHIBITINS 3, MITOCHONDRIAL 33 631 - -
Lapu1g00220 643 MobiDBLite consensus disorder prediction 115 138 - -
Lapu1g00220 643 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 266 483 IPR027417 -
Lapu1g00220 643 Coils Coil 196 219 - -
Lapu1g00220 643 MobiDBLite consensus disorder prediction 57 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00220 Lapu-Chr1 8942917 8947899 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00220 - - gmx:100805561 1070.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00220 1 8942917 8947899 Lapu1g00220 1 8942917 8947899 ECH