Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00205 ATGGTGTCAAAACCTGGTGGCTTTTATGAACAAGGGAGCTTTCCATCAATCAAAATCCTCATGCTTTTACTACTTAATTCTATACTTCACAAAGCCAACTCAGGCTGCAATAATAACTCTTCTTCAAATTCCTTAGCTCCATTTGCACCTCATGAGATCCTCTCATCATTGAAAACACTGCCTCTAGATGGCTACTTTAGCCTAAGTAACAATGAGGATGCTGCCAAGGACTTTGGCAACATCCACCATTTTCCTCCCCTGGCAGTGCTGCATCCAAAAACAGTTTCTGATATATCACGCACCATAAAACATGTTTTTGAAATGGGGTTTGCCTCAGAGCTGAAGGTTGCTGCTAGAGGCCATGGCCATTCCCTGCAAGGCCAGGCACAAGCACATGGGGGCCTAGTCATTAACATGGAGTCACTTCAGGGTCCTGAAATGAAAGTTCACATTGGAGAGTTCCCTTATGTGGATGTCTCAGGGGGAGAGTTGTGGATAAACATTCTGCATGAAACTCTTAAACATGGGTTGGCACCAAAGTCATGGACAGATTACCTTCACCTCACTGTTGGAGGCACTCTTTCAAATGCTGGTATAAGCGGGCAAGCCTTCAAACATGGACCTCAGATCAATAACATCTTTCAGCTTGAAGTCATTACAGGAAAAGGAGAGGTGGTTACCTGCTCAGGGAACCGAAACGCTGACCTTTTTCATGGTGTACTTGGAGGGCTTGGTCAATTTGGTATCATCACAAGGGCTAGAATTTCGCTTGAATCAGCACCAAAGATGGTGAAATGGATTAGAGTGCTCTACTCAGAATTCTCTATATTTACTAGAGATCAAGAGCATTTAATATCACTTCAAAACACATTTGATTATATTGAAGGGTTTGTGATCATAAATAAAACTGGCATCCTTAACAATTGGAGGTCGTCCTTTGATCCCAAAAGTCCACTTCAAGCAAGCCAATTCAATTCTGATGGGAGAACCTTCTACTGTCTTGAGATGGCAAAATACTTCAACCCTGATGAAGCAGAACTCATGAATCAGAATATTGATCACCTACTGTCAAAGCTGAGTTACATCCAACCCACACTCTTCCGATCAGAAGTTTCTTACGTGGAATTCCTGGACAGAGTGCATGTTTCTGAGAAAAAGCTAAGAGCAAAAGGCTTGTGGGAAGTCCCCCATCCCTGGCTGAACCTTCTGATCCCAAGAAGTGAGATTCATGACTTTGCTGAAGAAGTATTTGGCAATATTCTTAAGGACACAAGTAATGGCCCCATACTCATTTACCCCGTCAACCAAACAAGATGGAACAGTAAGACGTCTTTGGTTACCCCAGAGGAAGATGTTTTTTACCTGGTGGCATTTCTATCCTCAGCAGTTCCAAATTCTACTGGTGCAAATAGTTTAGAACAGATTGTAGCCCAAAACAAAAGGATCATAGAGTTCTACACCCGTGCCCAACTGAAAGTGAAGCAGTACCTTCCCCATTACAGCACACAGGAAGAATGGCAAGCCCACTTTGGGTCACAATGGGAGGCATTCGTGGAAAGAAAAAAGGCCTATGACCCACTAGCACTGCTTGCCCCTGGCCACAGAATCTTTCAAAAGGCAGTGTCTGCTTCATGCTAG 1638 0.4353 MVSKPGGFYEQGSFPSIKILMLLLLNSILHKANSGCNNNSSSNSLAPFAPHEILSSLKTLPLDGYFSLSNNEDAAKDFGNIHHFPPLAVLHPKTVSDISRTIKHVFEMGFASELKVAARGHGHSLQGQAQAHGGLVINMESLQGPEMKVHIGEFPYVDVSGGELWINILHETLKHGLAPKSWTDYLHLTVGGTLSNAGISGQAFKHGPQINNIFQLEVITGKGEVVTCSGNRNADLFHGVLGGLGQFGIITRARISLESAPKMVKWIRVLYSEFSIFTRDQEHLISLQNTFDYIEGFVIINKTGILNNWRSSFDPKSPLQASQFNSDGRTFYCLEMAKYFNPDEAELMNQNIDHLLSKLSYIQPTLFRSEVSYVEFLDRVHVSEKKLRAKGLWEVPHPWLNLLIPRSEIHDFAEEVFGNILKDTSNGPILIYPVNQTRWNSKTSLVTPEEDVFYLVAFLSSAVPNSTGANSLEQIVAQNKRIIEFYTRAQLKVKQYLPHYSTQEEWQAHFGSQWEAFVERKKAYDPLALLAPGHRIFQKAVSASC* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00205 545 ProSiteProfiles PCMH-type FAD-binding domain profile. 82 260 IPR016166 GO:0071949
Lapu1g00205 545 PANTHER GULONOLACTONE OXIDASE 59 538 - -
Lapu1g00205 545 FunFam Cytokinin dehydrogenase 2 263 496 - -
Lapu1g00205 545 Pfam FAD binding domain 86 229 IPR006094 GO:0050660
Lapu1g00205 545 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 86 121 IPR006093 GO:0016491
Lapu1g00205 545 Gene3D - 139 262 IPR016169 -
Lapu1g00205 545 FunFam Cytokinin dehydrogenase 1 137 262 - -
Lapu1g00205 545 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 261 537 IPR015345 GO:0009690|GO:0019139|GO:0050660
Lapu1g00205 545 SUPERFAMILY FAD-binding/transporter-associated domain-like 70 257 IPR036318 GO:0050660
Lapu1g00205 545 SUPERFAMILY FAD-linked oxidases, C-terminal domain 261 537 IPR016164 GO:0003824|GO:0050660
Lapu1g00205 545 Gene3D - 71 537 IPR016167 -
Lapu1g00205 545 Gene3D - 263 496 IPR016170 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00205 Lapu-Chr1 8418051 8420955 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00205 K00279 - gmx:100777568 979.933