Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00203 ATGTCGTCGTCCGCCGCGCTCCATTTCCAATCTCCGATCAACTCCACGGACGCGCCGCCGCATTCTTCCTTCCTTCATTTCAACGCCGACTGCTTAAACCCTTCCTCCTCCGCCGCCGCCGCGCGCACGAGGTCCCGACCGAGGCTCGCCAAACTCCGCAAGCAGTCTGCGTCTCAGCAGGCCAGGTCCCGGAACAGAGCCACTGGAGGCGACGACGATGGCGCCGGCTTCAATCCGTTTCGCGCCGATCAGGTAACCGGTAATGGTAGTGGATTAGAGAGTGGTTTTTCGAACTGTCGTCGTGACGATGGTTTTGTGTTTGGCGCTGGGAAGGTTGAGCCTGACTCCGCTAGGGATTTGAAGGGGGGAATTAGGAGTGTTAGTGTGGAATTTGTGTTTGGTGCTGGGAAGAGTGACGAGGGATTGGGAAAGAACGGTGAGAGTGTTACGGAGACGGTTCGTGGTGATGGAGGGAAGGTGGGGTCGAATTCGGAGAGGGAGTTGAAGAGTAGGGTGTTTGTTTTTGGTGCTTGTAGAAATGATTTGGATTCTGGCTTAAGTACAGAAAAGGGGAAATGTAGTGCGGGGTTGGGGAATTCAGGTGCGGAGAGGGAGTGTAAGTATGAATTTGAGTGTGGAAAGCGTGATTGCTTCGGGGGCAGCTATAGTGGTAGAGAGTCGAGTGTTAAGGTGGAGAAGAAAGAGCCTTTTGGCTGTGGGTGGAATTCGGATCGTGGAATGGGTGCTTTTGGTTTCGAGATGGGAATAAATGGTAATAGTGATACAGGTGCTGATCGGTATGATCATTTGAGTAAAGGTGATAAATCTAAGAGTGCATGTGGGAGTGCTAATGGTATTCCTGCTACTTGTGGTGGGGTTCCAGTGCGTAATTTATCAGATGAGATGGAGAAACTAAACATTAAACATTCTGAGGGTGCTGATATTAGTTGGAAATCGAAAAATTCACATGCTAATGGTTGTGCTGCTGGTTTTGTTTTTGGAGGAAATGACATGGGTTTTGGTTATTCTAGTTTTAGTTCAAGAACCGAAGCTGGTGGTCAGGAGTTCTGTGCTCCTGCTGCTTCTGGGAACGTTGGTGTTCAAAATGGAACTGCTTGTGGTAGTGATTCTACAGGAATACGTTCTAAGTCATCAACTAGTCAGGAAGGCGTCAGGGGTTTCCAGAATGGCGAAAATCCAGGTTGTTGTATGTCTGAAGATTCAAAAGTAAATGGAACTGCAGCGTCATTTTCCTTCTACTCTCATCCAAATTTTTATGCTTCCATGGACCATTCCTCGGGTGCAGATGGTGATAAGGGCGATAGTTGTTTTGCAAGTACTCCAGAGGCTTCAAAAGAGTCTTTTGCGGACTTCAAACCCCCGACATGGGATCCTTCTTGTTTCAAAGACAACTTATTTCCGAAGTTAAATAAAAAGGTTGAATCCACACAGAAGGGTCGATCATATAAGGAAAAAGGATCAAAATGTACCAGGAGAAAATTGAAGCTTCACTCCTTAAACAAGAAACAGACAGGGCCTGATCATTTGTCAAAGGAAAACAGTTCTACCAAAACCCCTGATTCTTCTGGTGTCCACTCACCAATGGATTTTTCTCCCTACCAGGAAACAACAGCTAGTGGTCAAGATGTAAAAGCTTCTAAAGGATTAAATGATTTGCATTCAAAAATTCCTACCGGTTATAAAGATGAAAACTTGCGTACTATAGGGAGAGAAGATATGAGTACAACTGATGGAAGGCGTGGAGATCTGGATAATAACAAAAGAGATGAAAATTCGTCTAATTTTCATTCTTCTGACCCTGAGATAGTTTGGCCTAATTTGAAAACTGAGCAATTCTGCGGTAGTAGTGCAGAAGGAGCTTCAGCTGCTGGTGCTGACTTCACCTCAAACACTGAAAGGGAAAAGGATGACATCTTTCGTTTTGTTCCTGGTCTGAATGAATCTAAGGGGAAAGATTTTTCGTTTTCTGCATCATCAACTGTGGATGGTACTCCATCATTAAAGCGTCAACAGAAGAAGAAATTTAGGAGGAAAGGGGGGTGCAACTCTTTTGTTATCTCTCCTCGCGTGAATGGAAAGTTTGTATCTTCTGTACAATTTTCACCACATAACACTGCCAACATGTCATCACATTCTGATGTGATGGATAGATCTCAGATAAATGGCCAGTGCAAGGACGGGGATGTTGCATCATCTGATACAACTCCGTCATCAGCCTGTGACAAGTGGAGATTCAGGGGGAACCAGGCCCATAAAGAGGGGGATCTTTCTAAAGCTGAGGACTTCTACACACTAGGAATAAATTCTGTACCTCCAAGTGAAAGATCTGGATGCTCAGTTCAGCCTCTTTTACTATGCTACAGTAATCGGGCAGCAACACGAATGAGTCTTGGAAGGATTAGAGAGGCTCTAGAAGATTGTGTGATGGCTACAGCTCTGGACCCTTCCTTTCCAAAAGTACAGATGAGAACTGCTAACTGCCACCTTTTGCTAGGGGAAGTAGAAAATGCGCAGCAGTGTTTTAACAAGTGCATGGAATCAGGTAGTGTTGTTTGTTTGGATCGGAGGGTTATAGTTGAAGCAGCTGATGGTTTACTAAAGGCTCAGGAAGTTCTCAAGTGTATAAATAATGCTGCTGAACTTTTAAAAGAGAGGACTTCTGAGGCAGCTGTTACAGCTTTAGAACTAGTTTCTAAGGCATTGTCTATAAGTTTATACTCAGAAAAATTGCTGCAAATGAAGGCAGAGGCTCTATGTTTGCTACAAAAGTATGAAGCAGCAATTCAGCTTTGTGAACAAAGTCAGCATCTTGCAGAAAAGAATTTTATCTTGGCTAACAATGCTGCGAACTATGATAGTTCCTTATGTGATAGTTACTCAAGTGTAAAATTGTGGAGGTGGTCATTGATATCCAAGTGTTACTTTCGTTTGGGAAGGCTTGAGGCATCACTTAAAGTTCTAGAGCAATTTCAGCGTGTTGTGTCTGTCACTGACAAGTGTGTGATTGATAATATTGAAGACTCATTATCATTAGCTTCTACAATAAGAGAACTTCTAGACCACAAGAGGGCAGGGAATGAGAACTTTAAAATGGGAAAGTTTCCAGAAGCTGTAGAGAATTACACTGCTGCTTTATCATGCAATATTAAATCACGTCCTTTTATGGCAATATGTTTCTGCAACCGTGCTGCTGCTCATCAAGCTTTGGGCCAAATTGCGGATGCCATTGCAGACTGCAGTGTGGCTATTGCCCTTGATGGAAATTATGCAAAGGCAATTTCAAGAAGAGCTACCTTACTTGAGATGGTTAGAGATTATGAACAAGCAGCTTGTGACCTCAAGAGACTCATAGCTGTTCTTGAAACTCAATCCAATGAAAGGGACAAACAATCTGACTCACCCAATGGGTCAAAAGGTGTGAAAGAATCAAGACAAGCTCATCAACGTCTTCTTTCAGTGGAAGATCAAGCCAAAAAGGGGACCCCCTTGGATGTTTACCTCATTTTAGGAATAAAATCAGCTGATACAGCAACGGATATCAAGAAAGCATACCACAAGGCAGCTCTCAGACATCATCCGGACAAGGCTGGTCAGTTGTTGGCAAGAAGTGAAGTTGGAGACGATGGCCGAGTTTGGAAGGAAATCTCACAGGAGGTGTACAAGGATGCTGATAAGCTTTTCAAAATGATTGGAGAAGCATATGCTGTCCTTTCAGACCCAGCCAAGCGCTCGGAGTATGATTTGGAAGAGGAGGTAAGGAAAGCTTGGAAGTTAAGTAACAGAAGTGGCACAAGCAGGAAATCTTCAGATGCTTATGGGTATGGAAGACCATTTGATGGTTACAAATCTCCCTCTGACAGAACTTCTAACAGACGAAATGGACGTGACCATTGGAAGACATATGGACATTCATATTCTCGATGGTAA 3948 0.44 MSSSAALHFQSPINSTDAPPHSSFLHFNADCLNPSSSAAAARTRSRPRLAKLRKQSASQQARSRNRATGGDDDGAGFNPFRADQVTGNGSGLESGFSNCRRDDGFVFGAGKVEPDSARDLKGGIRSVSVEFVFGAGKSDEGLGKNGESVTETVRGDGGKVGSNSERELKSRVFVFGACRNDLDSGLSTEKGKCSAGLGNSGAERECKYEFECGKRDCFGGSYSGRESSVKVEKKEPFGCGWNSDRGMGAFGFEMGINGNSDTGADRYDHLSKGDKSKSACGSANGIPATCGGVPVRNLSDEMEKLNIKHSEGADISWKSKNSHANGCAAGFVFGGNDMGFGYSSFSSRTEAGGQEFCAPAASGNVGVQNGTACGSDSTGIRSKSSTSQEGVRGFQNGENPGCCMSEDSKVNGTAASFSFYSHPNFYASMDHSSGADGDKGDSCFASTPEASKESFADFKPPTWDPSCFKDNLFPKLNKKVESTQKGRSYKEKGSKCTRRKLKLHSLNKKQTGPDHLSKENSSTKTPDSSGVHSPMDFSPYQETTASGQDVKASKGLNDLHSKIPTGYKDENLRTIGREDMSTTDGRRGDLDNNKRDENSSNFHSSDPEIVWPNLKTEQFCGSSAEGASAAGADFTSNTEREKDDIFRFVPGLNESKGKDFSFSASSTVDGTPSLKRQQKKKFRRKGGCNSFVISPRVNGKFVSSVQFSPHNTANMSSHSDVMDRSQINGQCKDGDVASSDTTPSSACDKWRFRGNQAHKEGDLSKAEDFYTLGINSVPPSERSGCSVQPLLLCYSNRAATRMSLGRIREALEDCVMATALDPSFPKVQMRTANCHLLLGEVENAQQCFNKCMESGSVVCLDRRVIVEAADGLLKAQEVLKCINNAAELLKERTSEAAVTALELVSKALSISLYSEKLLQMKAEALCLLQKYEAAIQLCEQSQHLAEKNFILANNAANYDSSLCDSYSSVKLWRWSLISKCYFRLGRLEASLKVLEQFQRVVSVTDKCVIDNIEDSLSLASTIRELLDHKRAGNENFKMGKFPEAVENYTAALSCNIKSRPFMAICFCNRAAAHQALGQIADAIADCSVAIALDGNYAKAISRRATLLEMVRDYEQAACDLKRLIAVLETQSNERDKQSDSPNGSKGVKESRQAHQRLLSVEDQAKKGTPLDVYLILGIKSADTATDIKKAYHKAALRHHPDKAGQLLARSEVGDDGRVWKEISQEVYKDADKLFKMIGEAYAVLSDPAKRSEYDLEEEVRKAWKLSNRSGTSRKSSDAYGYGRPFDGYKSPSDRTSNRRNGRDHWKTYGHSYSRW* 1316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00203 1315 Gene3D Tetratricopeptide repeat domain 747 1008 IPR011990 GO:0005515
Lapu1g00203 1315 MobiDBLite consensus disorder prediction 479 608 - -
Lapu1g00203 1315 Pfam DnaJ domain 1171 1254 IPR001623 -
Lapu1g00203 1315 PRINTS DnaJ domain signature 1173 1191 IPR001623 -
Lapu1g00203 1315 PRINTS DnaJ domain signature 1191 1206 IPR001623 -
Lapu1g00203 1315 PRINTS DnaJ domain signature 1229 1249 IPR001623 -
Lapu1g00203 1315 MobiDBLite consensus disorder prediction 1 24 - -
Lapu1g00203 1315 SUPERFAMILY Chaperone J-domain 1157 1253 IPR036869 -
Lapu1g00203 1315 Gene3D Tetratricopeptide repeat domain 1024 1146 IPR011990 GO:0005515
Lapu1g00203 1315 ProSiteProfiles dnaJ domain profile. 1171 1257 IPR001623 -
Lapu1g00203 1315 MobiDBLite consensus disorder prediction 373 394 - -
Lapu1g00203 1315 MobiDBLite consensus disorder prediction 373 399 - -
Lapu1g00203 1315 MobiDBLite consensus disorder prediction 563 602 - -
Lapu1g00203 1315 ProSitePatterns Nt-dnaJ domain signature. 1234 1253 IPR018253 -
Lapu1g00203 1315 MobiDBLite consensus disorder prediction 1266 1315 - -
Lapu1g00203 1315 SUPERFAMILY TPR-like 748 997 IPR011990 GO:0005515
Lapu1g00203 1315 Gene3D DnaJ domain 1163 1270 IPR036869 -
Lapu1g00203 1315 MobiDBLite consensus disorder prediction 492 506 - -
Lapu1g00203 1315 SUPERFAMILY TPR-like 1028 1125 IPR011990 GO:0005515
Lapu1g00203 1315 MobiDBLite consensus disorder prediction 142 163 - -
Lapu1g00203 1315 MobiDBLite consensus disorder prediction 1131 1154 - -
Lapu1g00203 1315 Coils Coil 872 892 - -
Lapu1g00203 1315 SMART tpr_5 1063 1096 IPR019734 GO:0005515
Lapu1g00203 1315 SMART tpr_5 1025 1058 IPR019734 GO:0005515
Lapu1g00203 1315 SMART tpr_5 825 858 IPR019734 GO:0005515
Lapu1g00203 1315 SMART tpr_5 1097 1130 IPR019734 GO:0005515
Lapu1g00203 1315 SMART tpr_5 747 780 IPR019734 GO:0005515
Lapu1g00203 1315 SMART tpr_5 791 824 IPR019734 GO:0005515
Lapu1g00203 1315 SMART tpr_5 915 948 IPR019734 GO:0005515
Lapu1g00203 1315 MobiDBLite consensus disorder prediction 516 551 - -
Lapu1g00203 1315 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 6 1315 - -
Lapu1g00203 1315 MobiDBLite consensus disorder prediction 36 94 - -
Lapu1g00203 1315 SMART dnaj_3 1170 1249 IPR001623 -
Lapu1g00203 1315 CDD DnaJ 1171 1246 IPR001623 -
Lapu1g00203 1315 MobiDBLite consensus disorder prediction 1292 1315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00203 Lapu-Chr1 8394149 8403242 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00203 K09527 - gmx:100809278 1814.66