Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00199 ATGGTGGGAAGCATAATGGGAGTGGTTCATAATGCATACTCAAATGGAAGTGTTGGTGCTCAGAATTGTAATGGGGTGGAGGAGAAGCTTGATGGTTTGAGGAGGCTTATTGGGAAGGCTGATGGTGACCCTTTGAGGATAGTGAGTGTTGGAGCTGGTGCTTGGGGCAGTGTTTTTGCAGCTTTGCTACAAGACAGTTATGGTCAATTCAGGGACAAGATACAGATCAGGATATGGAGAAGAGCAGGAAGGGCAGTGGATAGAGGCACTGCTGAACATCTCTTTGAGGTCATCAACTCAAGGGAAGATGTGTTGAGGAGGTTGATCAGGCGTTGTGCATATCTGAAATATGTTGAGGCAAGGCTTGGTGATAGGACCCTCTTTGCTGATGAGATTCTCAAAGATGGTTTTTGCTTGAACATGATTGATAACCCACTTTGTCCTTTGAAGGTGGTCACAAACTTGCAGGAAGCTGTTTGGGATGCTGATATTGTGGTCAATGGTTTGCCTTCTACAGAAACACGTGAGATCTTTGAAGAGATTAGTAAGTATTGGAAGGAGAGGATCACAGTGCCTATAATTATCTCTTTGTCAAAGGGTATACAGGCTGCATTGGAGCCTGTACCACATATTATTACTCCCACTAAGATGATTAACCAAGCAACTAGAGTGCCAATGGAGAACATACTTTATCTTGGGGGTCCAAATATTGCCTCAGAAATCTACAACAAGGAGTATGCCAATGCAAGAATATGTGGAGCTGAGAAATGGAGAAAACCTCTTGCGAAGTTCTTACGACAACCACACTTTATTGTCTGGGATAACAGTGACCTCGTCACACATGAGGTCATGGGGGGTTTGAAAAACGTCTATGCAATTGGAGCTGGAATGGTAGCTGCCCTTACCAATGAGAGTGCCACAAGCAAATCTGTGTACTTTGCACACTGCACATCAGAAATGATATTCATCACTCACTTGTTGGCTGAAGAACCTGAGAAACTTGCAGGGCCCTTACTGGCCGACACTTATGTAACCTTGTTGAAAGGGCGTAACGCTTGGTATGGCCAGATGTTAGCTAAGGGTCAATTAAGACCAGACATGGGTGACAGCATTAGTGGCAAAGGAATGATTCAGGGTGTGTCTGCAGTGGAGGCATTCTTTGAACTTCTGAGCCAATCTAGTCTGAATGTGTTGCATCCTGAAGAAAACAAGCCTGTTGCTCCTGTAGAGCTCTGTCCTATCTTGAAGACACTCTACAAAATTTTGATATCAAGGGAACAGTCATCACAAGCTATTCTGAAAGCCTTGAGGGATGAAAATCTGAATGATCCTCGCGAACGAATTGAGATAGCACAAAGCCATGTTTTCTACAAGCCTTCACTTCTTGGACAATCCTGA 1398 0.4413 MVGSIMGVVHNAYSNGSVGAQNCNGVEEKLDGLRRLIGKADGDPLRIVSVGAGAWGSVFAALLQDSYGQFRDKIQIRIWRRAGRAVDRGTAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLFADEILKDGFCLNMIDNPLCPLKVVTNLQEAVWDADIVVNGLPSTETREIFEEISKYWKERITVPIIISLSKGIQAALEPVPHIITPTKMINQATRVPMENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGQLRPDMGDSISGKGMIQGVSAVEAFFELLSQSSLNVLHPEENKPVAPVELCPILKTLYKILISREQSSQAILKALRDENLNDPRERIEIAQSHVFYKPSLLGQS* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00199 465 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 277 432 IPR008927 -
Lapu1g00199 465 FunFam Glycerol-3-phosphate dehydrogenase [NAD(+)] 139 273 - -
Lapu1g00199 465 FunFam Glycerol-3-phosphate dehydrogenase [NAD(+)] 27 108 - -
Lapu1g00199 465 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 277 431 IPR006109 GO:0005975|GO:0047952
Lapu1g00199 465 Gene3D - 277 437 IPR013328 GO:0016491
Lapu1g00199 465 FunFam Glycerol-3-phosphate dehydrogenase [NAD(+)] 277 437 - -
Lapu1g00199 465 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 49 66 IPR006168 GO:0006072|GO:0009331|GO:0047952
Lapu1g00199 465 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 270 294 IPR006168 GO:0006072|GO:0009331|GO:0047952
Lapu1g00199 465 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE 43 439 - -
Lapu1g00199 465 Gene3D - 142 273 - -
Lapu1g00199 465 Gene3D - 27 108 - -
Lapu1g00199 465 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 45 277 IPR036291 -
Lapu1g00199 465 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 149 251 IPR011128 GO:0016616|GO:0046168|GO:0051287
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00199 Lapu-Chr1 8328101 8332479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00199 1 464 Acyl Lipid Metabolism Gene Families AT2G41540 87.284 0.0 813
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00199 K00006 - gmx:100810871 908.672
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00199 1 8328101 8332479 Lapu1g00199 1 8328101 8332479 ECH