Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00171 ATGGCTTCTTTAGTATCTTCATCATTTACTCTACCAAGCTCTAAACCCGATCAGCTTCATTCTCTTGCCCAAAAGCATCTTTTTCTTCATTCTTTCCTTCCCAAGAAGGCTGGTTATAGTGGTAGCTCAAAATCCTCTCTGAGAGTGAAATGTGCTACCGTTGGCAATGGTCTATTCACCCAAACCACCCCAGAAGTTCGTAGAATAGTTCCAGAGAATGACCAAAACTTGCCAACAGTTAAAATTGTGTATGTGGTCCTTGAGGCTCAGTACCAATCATCTCTCACTGCTGCTGTCCTGGCTCTCAACAGTAAAAGGAAACATGCTTCCTTTGAGGTTGTGGGTTACTTGGTTGAGGAGCTTAGAGACGCGTCAACGTATAAGACTTTCTGCAAGGACTTGGAGGATGCTAACGTCTTCATTGGGTCTTTGATTTTTGTGGAGGAGCTTGCTCTCAAGATCAAGGCTGCAGTGGAGAAAGAAAGGGACAGGCTTGATGCAGTTTTGGTGTTTCCATCAATGCCTGAAGTGATGAGGCTTAATAAGTTGGGTTCTTTCAGCATGTCACAGCTTGGGCAATCTAAGAGCCCCTTTTTCCAGCTTTTCAAGAGAAAGAAGCCTCAGTCTGCTGGTTTTGCTGACAGCATGTTGAAGCTTGTGAGGACATTGCCAAAGGTTTTGAAGTATTTGCCAAGTGATAAAGCTCAGGATGCCAGGCTCTATATACTGAGTCTGCAATTTTGGCTTGGGGGATCTCCTGATAACTTGCAGAATTTCCTGAAAATGATTACTGGATCTTATATTCCAGCACTGAAAGGTACGAAGATAGAGTATTCGGAGCCGGTTTTGTACTTGGACATTGGGATTTGGCACCCTTTGGCTCCTTGTATGTATGATGATGTAAAGGAGTATTTGAATTGGTATGGTACTAGAAGGGATGCAAATGAGAAGCTGAAGTCTCCGAATGCACCTGTCATTGGTTTGGTTTTGCAAAGGAGTCATATTGTGACAGGTGATGAAGGACATTATGTGGCTGTGATCATGGAGCTGGAGGCTAAAGGGGCTAAGGTCATCCCCATTTTTGCTGGTGGACTTGACTTTTCAGGGCCAGTGGAGAAGTTCTTCATTGATCCAATTACGAAGAAACCATTTGTGAATTCTGTGGTATCCCTCACTGGCTTTGCTCTTGTTGGAGGGCCAGCAAGGCAGGACCATCCAAGGGCGGTTGAGGCTTTAATGAAACTTGATGTTCCTTACATTGTTGCCCTGCCACTGGTGTTTCAGACAACAGAAGAGTGGCTCAACAGTACTCTTGGTCTGCATCCAATACAGGTTGCTCTTCAAGTTGCTCTGCCAGAGCTAGATGGAGGCATGGAGCCAATTGTTTTCGCTGGTCGAGATCCTAAAACAGGAAAATCACATGCTCTTCATAAGAGAGTGGAACAACTCTGCATCAGGGCAATCAGATGGGCTGAATTGAAAAGAAAATCAAAGGAAGAGAAGAAACTAGCAATCACCGTCTTCAGTTTCCCTCCAGACAAAGGAAATGTGGGAACTGCTGCCTATCTCAATGTCTTTGCCTCCATATACTCAGTTATGAAAGAACTAAAAAGAGATGGTTATAATGTTGACGGCCTTCCAGAGACTCCAGAAGCTTTGATTGAAGACGTAATTCATGACAAAGAAGCTCAATTCAGCAGTCCTAATTTGAACATTGCTTACAAAATGAGCGTCCGAGAGTACCAAAATTTGACTCCCTATTCCACATCACTGGAAGAGAATTGGGGAAAACCCCCTGGCAATCTGAATGCAGATGGAGAAAATCTGTTGGTATATGGGAAAGAATATGGTAATGTCTTCATAGGTGTTCAGCCTACATTTGGCTATGAAGGGGATCCAATGAGGCTGCTTTTCTCCAAATCTGCCAGCCCTCATCATGGATTTGCAGCATTTTATTCCTTTGTTGAGAAAATCTTCAAAGCTGATGCTGTACTTCACTTTGGGACACATGGTTCCCTTGAATTCATGCCTGGAAAACAGGTGGGGATGAGTGATGTATGTTATCCTGACAGTCTAATTGGTAATATTCCAAATGTGTATTACTATGCTGCAAACAACCCTTCTGAGGCCACCATAGCCAAGCGCAGAAGTTATGCAAACACCATTAGCTATCTGACTCCTCCAGCGGAAAATGCTGGACTATACAAAGGTCTTAAGCAGTTAAGTGAGCTCATCTCCTCGTACCAGTCTCTCAAAGACACTGGCCGTGGGGCACAAATTGTGAGTTCAATTATTAGCACAGCTAAACAGTGTAATCTTGACAAAGATGTGACACTGCCAGATGAGGGTGAGGAGATCCCACCTAAAGAGCGCGATCTTGTGGTTGGAAAGGTGTATTCCAAGATCATGGAGATTGAGTCTCGTCTGTTACCTTGTGGGCTTCATGTCATTGGTGAGCCTCCCTCAGCTTTGGAAGCAGTTGCTACACTGGTGAACATTGCTGCACTTGATCGTCCTGAAGATGGTATTTCTTCTCTTCCATCAATATTGGCTGACACTGTTGGAAGAGATATAGAAGATGTGTATAGAGGAAGTAACAAAGGAATATTGAAGGATGTAGAGCTTCTTAGGCAAATAACAGAGGCATCACGTGGAGCAATCACTGCCTTTGTGGAGCGCACTACCAATAGTAAGGGTCAAGTTGTTGATGTAGCTGATAAGCTTACCTCAATCCTTGGGTTTGGCATAAATGAGCCATGGATTCAGTACTTGTCAAACACCAAATTTTACCGAGCTGACAGGGAAAAACTTAGAACCTTGTTTATGTTCCTGGGAGAATGCTTGAAGTTGGTTGTGGCTGATAATGAAGTGGGAAGTTTAAAGCAAGCCTTGGAAGGTAAATATGTGGAGCCAGGTCCTGGTGGTGACCCAATAAGAAATCCTAAAGTTTTGCCAACAGGAAAGAATATTCATGCCCTGGACCCACAATCTATTCCTACAACTGCTGCAATGCAGAGTGCCAAAATAGTGGTAGACAGATTGATTGAGAGGCAGAAAGCTGAGAATGGTGGAAAATATCCTGAGACGATTGCACTTGTATTGTGGGGAACTGATAATATTAAAACATATGGTGAATCACTGGCTCAGGTTTTGTGGATGATTGGTGTGATACCAGTGGCTGATACCTTTGGTAGGGTCAACCGGGTGGAACCCGTAAGTCTTGAAGAGCTTGGAAGGCCTAGGATTGATGTTGTTGTTAATTGTTCAGGGGTGTTCAGAGACCTTTTCATCAATCAGATGAACCTTCTAGACGGAGCAGTGAAGATGGTTGCTGAATTAGATGAACCAGCAGAGCAAAACTATGTAAGAAAGCATGCATTAGAACAGGCTCAAGCCCTTGGAGTTGAAGTTCGAGAGGCAGCAACAAGGATCTTCTCCAACGCCTCCGGCTCCTACTCCTCTAACATAAACCTGGCTGTGGAGAATTCCTCATGGAATGATGAGAAGCAGCTCCAGGACATGTATCTTAGCAGAAAGTCTTTTGCTTTTGATTGTGATGCCCCTGGTGCTGGCATGACTGAGAAAAGAAAAGTCTTTGAGATGGCTCTCAGCACAGCAGATGCCACATTCCAAAACCTTGATTCATCAGAAATTTCCCTCACTGATGTTAGTCATTACTTTGACTCAGACCCAACTAATCTGGTTCAAAATCTAAGGAAAGATGGGAAGAAGCCCAGTGCATACATTGCCGATACAACTACTGCCAATGCTCAGGTACGCACACTTTCTGAGACAGTTAGACTTGACGCAAGAACCAAACTTTTGAACCCAAAGTGGTATGAAGGCATGTTGTCTACTGGATATGAGGGTGTTCGTGAGATTGAGAAGAGACTCACCAATACAGTGGGATGGAGTGCAACATCAGGCCAAGTTGACAACTGGGTGTATGAAGAAGCCAACACAACTTTCATTCAAGATGAGCAAATGCTGAACAAGCTCATGAACACTAATCCAAACTCTTTCAGGAAGCTGGTTCAGACATTCTTGGAAGCCAATGGACGTGGTTACTGGGAAACTTCAGAAGAGAATATTGAGAAGCTCAGGCAGTTGTATTCGGAGGTGGAAGACAAAATTGAAGGCATTGATCGTTGA 4152 0.4388 MASLVSSSFTLPSSKPDQLHSLAQKHLFLHSFLPKKAGYSGSSKSSLRVKCATVGNGLFTQTTPEVRRIVPENDQNLPTVKIVYVVLEAQYQSSLTAAVLALNSKRKHASFEVVGYLVEELRDASTYKTFCKDLEDANVFIGSLIFVEELALKIKAAVEKERDRLDAVLVFPSMPEVMRLNKLGSFSMSQLGQSKSPFFQLFKRKKPQSAGFADSMLKLVRTLPKVLKYLPSDKAQDARLYILSLQFWLGGSPDNLQNFLKMITGSYIPALKGTKIEYSEPVLYLDIGIWHPLAPCMYDDVKEYLNWYGTRRDANEKLKSPNAPVIGLVLQRSHIVTGDEGHYVAVIMELEAKGAKVIPIFAGGLDFSGPVEKFFIDPITKKPFVNSVVSLTGFALVGGPARQDHPRAVEALMKLDVPYIVALPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGGMEPIVFAGRDPKTGKSHALHKRVEQLCIRAIRWAELKRKSKEEKKLAITVFSFPPDKGNVGTAAYLNVFASIYSVMKELKRDGYNVDGLPETPEALIEDVIHDKEAQFSSPNLNIAYKMSVREYQNLTPYSTSLEENWGKPPGNLNADGENLLVYGKEYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAFYSFVEKIFKADAVLHFGTHGSLEFMPGKQVGMSDVCYPDSLIGNIPNVYYYAANNPSEATIAKRRSYANTISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGAQIVSSIISTAKQCNLDKDVTLPDEGEEIPPKERDLVVGKVYSKIMEIESRLLPCGLHVIGEPPSALEAVATLVNIAALDRPEDGISSLPSILADTVGRDIEDVYRGSNKGILKDVELLRQITEASRGAITAFVERTTNSKGQVVDVADKLTSILGFGINEPWIQYLSNTKFYRADREKLRTLFMFLGECLKLVVADNEVGSLKQALEGKYVEPGPGGDPIRNPKVLPTGKNIHALDPQSIPTTAAMQSAKIVVDRLIERQKAENGGKYPETIALVLWGTDNIKTYGESLAQVLWMIGVIPVADTFGRVNRVEPVSLEELGRPRIDVVVNCSGVFRDLFINQMNLLDGAVKMVAELDEPAEQNYVRKHALEQAQALGVEVREAATRIFSNASGSYSSNINLAVENSSWNDEKQLQDMYLSRKSFAFDCDAPGAGMTEKRKVFEMALSTADATFQNLDSSEISLTDVSHYFDSDPTNLVQNLRKDGKKPSAYIADTTTANAQVRTLSETVRLDARTKLLNPKWYEGMLSTGYEGVREIEKRLTNTVGWSATSGQVDNWVYEEANTTFIQDEQMLNKLMNTNPNSFRKLVQTFLEANGRGYWETSEENIEKLRQLYSEVEDKIEGIDR* 1384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00171 1383 CDD CobN_like 156 1254 IPR003672 GO:0009058
Lapu1g00171 1383 Coils Coil 1357 1383 - -
Lapu1g00171 1383 PANTHER MAGNESIUM-CHELATASE SUBUNIT CHLH, CHLOROPLASTIC 24 1382 IPR003672 GO:0009058
Lapu1g00171 1383 Pfam Domain of unknown function (DUF3479) 81 242 IPR022571 GO:0016851
Lapu1g00171 1383 Pfam CobN/Magnesium Chelatase 246 1363 IPR003672 GO:0009058
Lapu1g00171 1383 NCBIfam magnesium chelatase subunit H 81 1381 IPR011771 GO:0015995|GO:0016851
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00171 Lapu-Chr1 7473565 7481591 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00171 K03403 - gmx:100787735 2669.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00171 1 7473565 7481591 Lapu1g00171 1 7473565 7481591 ECH