Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00144 ATGGAAAGTGGGGTGACTATTAAGAAAGCATCGCCTTCATCTTCGCAGCAATTCGTTTCTGTTACCACCCCTCTGCTTGATTTGGAAAAGGAAACTGGGAAATCAAGCAGAGGAGTGTTTCGAGAGGGGGTCATAGAGGAGTCTGAGAAATATGAATTGGAAGTTGAGGACTCTCCCATAGAGCAAGTGAGGCTATCAGTTCCAATCACTGATGACCCTACTCAGCCAGCACTAACATTTCGGACTTGGGTTCTGGGTTTGGCATCATGTGTGCTTCTTGCCTTTCTGAACCAGTTTTTTGGTTACAGAACCAACCCTTTAAACATCTCTTCAGTCTCAGCACAGATTGTTACACTCCCTCTTGGCAAACTGATGGCTGCAACTCTTCCGACTAAACCAATCCAAGTGCCATTCACGAAATGGTCATTTTCAATGAATCCCGGGCCATTCACTTTGAAGGAGCATGTGCTTATCACCATCATTGCTACATCTGGGTCTAGTGGTGTTGATGCAATCTACATAATCACAACTGTTAAGGCTTTCTATCACAGGAGCATCCATCCAGTAGCAGCTTATTTGTTAGCACTGTCAACCCAAATGCTTGGGTATGGATGGGCTGGGATTTTTAGAAGATTCCTAGTTGACTCCCCTTTTATGTGGTGGCCTGAAAATCTTGTGCAGGTGTCTCTATTCAAGGCATTTCATGAAAAAGAAAAAAGGCCTAAAGGAGGAAACACTAGGATGCAATTCTTTTTCCTAGTTTTTGTAGCGAGCTTTGCCTATCACATTGTTCCGGGGTACCTTTTCCAAGCAATATCAACCATCTCCATTGTTTGCTTGATTTGGAATGATTCCATCACAGCCCAACAAATTGGTTCAGGCATGAATGGAATTGGCCTCGGCTCATTTGGCCTCGATTGGAACACTGTTGCAGGCTTCTTAGGTAGTCCTTTAGCTGTACCTGGCTTTGCCATCATCAACATGTTAATAGGATTTGTGCTGGATATCTATGTTCTGGTTCCACTTGCCTATTGGATCAATTTATATGATGCCAAAAAGTTCCCCCTCATTAGTTCTCACACATTTGACTCAACTGGTGCAACATATAATATTACTCGGGTTCTAAATCCCAGAACTTTTGACATTGATTTGGATAGTTATAACAATTACAGCAAGATATATCTTAGTATCACATTTGCGTATGAGTATGGATTAAGCTTTGCAACTTTGACTGCCACTATTTCCCATGTTGTCCTCTTCCATGGAGAAATGATTCTTCAGACGTGGAGGAAGACAACAAGAGCACCAAAAGAACAACTTGACGATGTCCATACAAGAATTATGAAGAGAAACTATGAACAAGTCCCTGAATGGTGGTTTGTCACCATATTGACCCTTATGGTTGTTGTGGCCTTGGTTGCTTGTGAATGCTTTGGGAAACAACTCCAACTGCCATGGTGGGGAATTTTACTTTCTCTAACAATTGCATTAGTCTTCACCTTGCCAATTGGGGTTATTCAAGCTACAACAAACATAAAAATAGGACTCAACGTGATTTCAGAGTTATTAATTGGATTCATTTACCCAGGAAAACCCCTTGCTAACGTAGTCTTCAAGATTTACGGACATGTCAGCATGGTACAGGCACTCGCGTTTCTTAGTGACTTCAAATTAGGCCACTACATGAAAATTCCTCCTAAATCTATGTTCATTGTGCAGCTGGTAGGCACAGTTGTTGCTTCGACTGTCTACTTTGCCACATCTTGGTGGCTCCTGACATCTATTGAAAACATTTGTGATGAAGCATTGTTGCCAAAGGGTAGTCCATGGACATGCCCTGGTGACAATCTGTTCTATAATGCTTCAATCATATGGGGAGTCGTAGGGCCACAGAGGATGTTCGCCAAGGATGGTGTTTACCCTGGGATGAATTGGTTTTTCCTCATTGGTCTACTTGCTCCCATTCCAGTGTGGTTGCTTTCTCGTAAATTCCCCAACCACAAGTGGATTCAACTCATCAACATTCCCATTATCGCTGCAGGTGCATGCAACATTCCACCAGCCAGATCAGTGAATTATATTACATGGGGTATTGTTGGAATCTTCTTCAATTTCTATGTTTATAGAAAGTTTAAGACATGGTGGGTCCGGCATACTTACATCCTTTCAGCTGCTTTAGATGCTGGAGTTGCTTTCATGAGTGTGATCCTCTATTTTGCCCTTCAATCTAATGGTATTTTTGGTCCAGCCTGGTGGGGTCTTGATGCAGACCACTGCCCTTTGGCCAAATGCCCCACAGCTCCAGGTGTAAATGCCGAGGGATGCCCTCTTCTTTGA 2337 0.4283 MESGVTIKKASPSSSQQFVSVTTPLLDLEKETGKSSRGVFREGVIEESEKYELEVEDSPIEQVRLSVPITDDPTQPALTFRTWVLGLASCVLLAFLNQFFGYRTNPLNISSVSAQIVTLPLGKLMAATLPTKPIQVPFTKWSFSMNPGPFTLKEHVLITIIATSGSSGVDAIYIITTVKAFYHRSIHPVAAYLLALSTQMLGYGWAGIFRRFLVDSPFMWWPENLVQVSLFKAFHEKEKRPKGGNTRMQFFFLVFVASFAYHIVPGYLFQAISTISIVCLIWNDSITAQQIGSGMNGIGLGSFGLDWNTVAGFLGSPLAVPGFAIINMLIGFVLDIYVLVPLAYWINLYDAKKFPLISSHTFDSTGATYNITRVLNPRTFDIDLDSYNNYSKIYLSITFAYEYGLSFATLTATISHVVLFHGEMILQTWRKTTRAPKEQLDDVHTRIMKRNYEQVPEWWFVTILTLMVVVALVACECFGKQLQLPWWGILLSLTIALVFTLPIGVIQATTNIKIGLNVISELLIGFIYPGKPLANVVFKIYGHVSMVQALAFLSDFKLGHYMKIPPKSMFIVQLVGTVVASTVYFATSWWLLTSIENICDEALLPKGSPWTCPGDNLFYNASIIWGVVGPQRMFAKDGVYPGMNWFFLIGLLAPIPVWLLSRKFPNHKWIQLINIPIIAAGACNIPPARSVNYITWGIVGIFFNFYVYRKFKTWWVRHTYILSAALDAGVAFMSVILYFALQSNGIFGPAWWGLDADHCPLAKCPTAPGVNAEGCPLL* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00144 778 NCBIfam OPT family oligopeptide transporter 62 742 IPR004813 GO:0035673
Lapu1g00144 778 PANTHER ISP4 LIKE PROTEIN 49 776 IPR004648 GO:0055085
Lapu1g00144 778 NCBIfam small oligopeptide transporter, OPT family 56 743 IPR004648 GO:0055085
Lapu1g00144 778 Pfam OPT oligopeptide transporter protein 78 740 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00144 Lapu-Chr1 6728531 6731512 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00144 56 778 Organic Solute Cotransporters AT4G26590 65.470 0.0 1021
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00144 - - gmx:100820498 1415.98