Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00141 ATGGCTATTGCTGCAGCAGCTGTCGTCGTGCCATTGGGTCTTCTCTTCTTCGCCTCCGGCCTCCTTGTTAATCTCATTCAGGCGATATGCTATGTTATTTTAAGGCCGGTGTCGAAGAATTTGTACCGACGGATCAACCGGGTTGTAGCAGAACTGTTGTGGCTGGAACTTGTATGGCTTATTGATTGGTGGGCAGGAGTTAAGGTCCAAATATTCACAGATAATGAGACCTTTCATTTAATGGGTAAAGAGCATGCGCTTGTGATAAGCAATCACAGAAGTGATATTGATTGGCTTGTTGGATGGGTTTCAGCTCAGCGTTCAGGTTGTCTTGGCAGCACTCTAGCTGTGATGAAGAAATCTTCAAAGTTTCTGCCGGTCATTGGCTGGTCAATGTGGTTTTCTGAGTATCTTTTTCTGGAGAGAAGTTGGGCCAAGGATGAAAGCACATTAAGGTCAGGCATCCAACGACTGAGTGATTTTCCTCTTCCCTTTTGGTTGGCTCTCTTTGTAGAAGGAACACGCTTTACACAGGTCAAACTATTAGCTGCTCAGGAATATGCAACTTCCACTGGATTGCCTGTTCCTAGAAATGTTTTAATTCCAAGAACTAAGGGTTTTGTTTCTGCAGTAAGTCATATGCGCTCATTTGTTCCTGCCATTTATGATGTAACAGTAGCTGTTCCCAAGAATTCCCCTGCTCCTACAATGCTAAGACTCTTCAAAGGGCAATCTTCAGTAGTGCATGTTCATGTCAAGCGGCATTTGATGAAGGAATTGCCAGAAACAGATGAGGCCGTTGCTCAATGGTGTCGAGATATATTTGTGGCCAAGGATGCTCTGTTAGACAAACATAGAGCTGAGGATACTTTTAGTGACAAAGAGCTGCAGCATACTGGTCGACCAATAAAGTCTCTTCTGGTAGTGATATCTTGGGCCTGTCTGGTTGTTGCGGGGTCTGTGAAGTTCCTACAACGGTCTTCACTACTATCTTCCTGGAAGGGTGTTGCATTCTCAGCTATTGGTTTGGCAGTTGTTACTGCACTCATGCAAATTATGATTCAATTCTCACAGTCGGAGCGTTCAAACCCTACCAAGATCGCCCCTGCTCAGTCAAAAACAAAGGGGGAACAACTAGAGGCTAGGAATGACAAGCAACAGTAG 1164 0.4476 MAIAAAAVVVPLGLLFFASGLLVNLIQAICYVILRPVSKNLYRRINRVVAELLWLELVWLIDWWAGVKVQIFTDNETFHLMGKEHALVISNHRSDIDWLVGWVSAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERSWAKDESTLRSGIQRLSDFPLPFWLALFVEGTRFTQVKLLAAQEYATSTGLPVPRNVLIPRTKGFVSAVSHMRSFVPAIYDVTVAVPKNSPAPTMLRLFKGQSSVVHVHVKRHLMKELPETDEAVAQWCRDIFVAKDALLDKHRAEDTFSDKELQHTGRPIKSLLVVISWACLVVAGSVKFLQRSSLLSSWKGVAFSAIGLAVVTALMQIMIQFSQSERSNPTKIAPAQSKTKGEQLEARNDKQQ* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00141 387 CDD LPLAT_LCLAT1-like 62 253 - -
Lapu1g00141 387 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 9 359 - -
Lapu1g00141 387 MobiDBLite consensus disorder prediction 361 387 - -
Lapu1g00141 387 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 33 278 - -
Lapu1g00141 387 SMART plsc_2 86 208 IPR002123 GO:0016746
Lapu1g00141 387 Pfam Acyltransferase C-terminus 239 312 IPR032098 -
Lapu1g00141 387 Pfam Acyltransferase 83 228 IPR002123 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00141 Lapu-Chr1 6627003 6637259 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00141 3 373 Miscellaneous Gene Families AT3G57650 75.472 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00141 K13523 - gmx:100792858 710.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00141 1 6627003 6637259 Lapu1g00141 1 6627003 6637259 ECH