Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00133 ATGAAAGAAATTGAGAAGAGAAAAGCTTCAAGAAATAGTCAGACAAAGGGTTCAAGAAAACCCGAAAGGAGAGAGAATAAATTGCATCAAGATAGTTCTTCCAAAACGTTGAATGAAAAAGGAATTGAATCTAAGACACTCCATGATAGTAGACCAACTGCAAATAATATTATAAGTGATTCCAACACGGCCTCAGAGAATTCAGAAACTTATGAAAATGTGGTTATACATTATCTGGATGATGTCAACAGGTCTGAGGAAGCACTTGCCGAGATGAAAGTTAATGAAATGGTTGCTAATGAAAACAAAAATGAAGTGGCTGATGATCATTCCACTGATTTGGAGAAAGAGCAAAGAGAAGGGAATGAAGAAGTATCAGATGCAGAGACAGTAAAGGATTCAGTATCTTCCCAAGGTGATTCTTTCACAAATGAGGATGAGAAAACTGAAAGGGCTTCCAAAGATCCTAAAAGTAAGGTTAGAGTGAATCCTCCAGAAAACAACCGTGGCTCAAAGGAGAGATCTGATAGAAAAACAAATAAGTTGCAATCAAAGGTATCACATAGCAATCAAAAGAAACCTCTGAACTCAAATAAAGGGCCCTCCAAAGCGGCAAATAAAAGTACTTCCTCAATCAATTCTAAGACTGTGAAAGTTCCTATAAATGTTTCATCAGAATCTTCTGAAGGTGTAGATGAAAAACCTGTTCAAGAGATCAAGGAACCTGATATTGTGGATGGTTCCCTCAATGGTGCTCAGAGCATGGGAAGTGAAGATGAAAGTCATGAAACAGTTAATGCTGAAGAAAATGGTGAACATGAGGACGAGGCAGCTGCGGAATTAAAAATTGAAGAAATGGAATTACGAATTGAAAAGCTCGAAGAGGAACTTAGAGAAGTTGCTGCTCTTGAAGTATCACTTTATTCTATTGTACCAGAGCACGGAAGCTCAGGACACAAGGTGCACACTCCAGCTCGGCGCCTTTCTCGGCTCTATATACATGCTTGTAAGCATTGGACCCAAAAAAGGCGAGCCACAATTGCCAAGAATACTGTTTCTGGCCTCATTTTGGTTGCTAAGTCTTGTGGTAATGATGTTTCAAGGTTAACTTTCTGGTTGTCAAATACCGTTGTGCTGAGAGAAATAATTTCACAAGCTTTTGGAAATTCATGTCAAGCTAGTCCCCTTAAAAGGTTGGCCGAGTCAAATGGGTCTGGCAAGAGAAATGATGGTAGCTATATGGCACTGAAACGGAAAGGTAGCTCCAATGGTAAACCAGGAAATGGTTTTATGCCTCTTGTTGAAGATTGGCAAGAGACAGGAACCTTTACCTTTGCTTTGGAAAGAGTAGAATCATGGATCTTCTCTCGGATAGTGGAGTCAGTGTGGTGGCAGGCTTTGACTCCCTATATGCAGTCTCCAGTTGGAGACTCTTCAAATAAATCAATTGGGAAGCTGATGGGACCCGCTCTAGGTGATCACAATCAAGGAAATTTTTCCATCAATCTCTGGAGAAATGCTTTCCAAGATGCCTTTCAACGACTCTGTCCCGTTCGAGCAGGAGGACATGAGTGTGGTTGTTTGCCCGTATTGGCTAGAATGGTCATGGAACAATGCATAGCTAGACTAGATATTGCTATGTTCAATGCTATTCTCAGGGAGTCGGCCCTTGAGATCCCAACTGATCCTATATCAGACCCTATTGTGGATTCAAAGGTTTTGCCAATTCCAGCTGGAGATTTAAGCTTTGGGTCTGGTGCACAGCTAAAAAATTCTGTTGGCAATTGGTCTAGATGGCTTACTGACATGTTTGGCATGGATGTTGAAGAATGTCTACAAGATCAGGAGAACAGTGAGAATGATGAAAAGCAGGGTGGGGATGGAGAACCTAAATCTTTTGTTCTCCTAAACGACTTGAGTGACCTTCTTATGCTACCTAAAGACATGCTTATAGATAGAAAAATCAGACAGGAGGCGTGTCCATCCATCAGTCTTTCATTGGTTATAAGGGTTCTCTGTAACTTCACTCCAGATGAGTTCTGTCCAGACCCTGTTCCAGGAACTGTCTTGGAGGCCCTGAACGCAGAGACTATTATAGAACGAAGATTGTCATCAGAACCTGTAAGAAGCTTCCCCTATGTGGCTGCTTCTGTTGTGTACATGCCTCCCTCCTCTGCTAATGTGGCAGAGAAAGTTGCAGAGGCTGGAGGAAAGTCTCACTTGGCAAGAAATGTATCAGCTGTTCAGAGGAGAGGATACACCAGTGATGAAGAGCTAGAGGAACTTGATTCCCCTCTTACATCCATCATTGATAAGCTTCCTTCCTCTCCATCAGTCACTCATAATGGAAAAGGTAATCACAAAGAACAAGGGGGGCACCCCACCACAAATGCTAGATACCAACTCCTGCGTGAAGTTTGGTCAATGTGA 2430 0.4189 MKEIEKRKASRNSQTKGSRKPERRENKLHQDSSSKTLNEKGIESKTLHDSRPTANNIISDSNTASENSETYENVVIHYLDDVNRSEEALAEMKVNEMVANENKNEVADDHSTDLEKEQREGNEEVSDAETVKDSVSSQGDSFTNEDEKTERASKDPKSKVRVNPPENNRGSKERSDRKTNKLQSKVSHSNQKKPLNSNKGPSKAANKSTSSINSKTVKVPINVSSESSEGVDEKPVQEIKEPDIVDGSLNGAQSMGSEDESHETVNAEENGEHEDEAAAELKIEEMELRIEKLEEELREVAALEVSLYSIVPEHGSSGHKVHTPARRLSRLYIHACKHWTQKRRATIAKNTVSGLILVAKSCGNDVSRLTFWLSNTVVLREIISQAFGNSCQASPLKRLAESNGSGKRNDGSYMALKRKGSSNGKPGNGFMPLVEDWQETGTFTFALERVESWIFSRIVESVWWQALTPYMQSPVGDSSNKSIGKLMGPALGDHNQGNFSINLWRNAFQDAFQRLCPVRAGGHECGCLPVLARMVMEQCIARLDIAMFNAILRESALEIPTDPISDPIVDSKVLPIPAGDLSFGSGAQLKNSVGNWSRWLTDMFGMDVEECLQDQENSENDEKQGGDGEPKSFVLLNDLSDLLMLPKDMLIDRKIRQEACPSISLSLVIRVLCNFTPDEFCPDPVPGTVLEALNAETIIERRLSSEPVRSFPYVAASVVYMPPSSANVAEKVAEAGGKSHLARNVSAVQRRGYTSDEELEELDSPLTSIIDKLPSSPSVTHNGKGNHKEQGGHPTTNARYQLLREVWSM* 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00133 809 MobiDBLite consensus disorder prediction 1 69 - -
Lapu1g00133 809 MobiDBLite consensus disorder prediction 184 230 - -
Lapu1g00133 809 MobiDBLite consensus disorder prediction 1 47 - -
Lapu1g00133 809 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 265 807 IPR021827 GO:0005643
Lapu1g00133 809 MobiDBLite consensus disorder prediction 102 130 - -
Lapu1g00133 809 MobiDBLite consensus disorder prediction 774 796 - -
Lapu1g00133 809 MobiDBLite consensus disorder prediction 143 183 - -
Lapu1g00133 809 MobiDBLite consensus disorder prediction 95 274 - -
Lapu1g00133 809 Coils Coil 100 120 - -
Lapu1g00133 809 MobiDBLite consensus disorder prediction 48 69 - -
Lapu1g00133 809 Coils Coil 276 303 - -
Lapu1g00133 809 MobiDBLite consensus disorder prediction 399 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00133 Lapu-Chr1 6417905 6424136 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00133 - - pvu:PHAVU_001G137700g 1416.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00133 1 6417905 6424136 Lapu1g00133 1 6417905 6424136 ECH