Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00107 ATGACGGAACCAACGGAGCCATCCACCTCATCTTCATTGCCAAGGGACCCAAGCACTGTGATTCACCCAAGGCGCGAGCCCTTCGAGCACGGTCTCTTGCCAATCCCACGACTCATCTTCTCCGACCCCGCGCAAACCCTAATTCCGTTGAAGCGGAAGCTTCTACAGTTATCCTCCAACCAGCGAGTCGACTCGGTGGCCATCTCCGACTCACTTCAGATCTCCATTGAGCACGCCAGACTCGTCCTCGATACCCTCGCCTCGATTCTGCACTCCGACTCCGAACCTCTCATCGCCGCAAAGCTCGGCGAAATCGATTCCGTCGGTGTCGACGTCCATGATCTGGTATTGTTCCTCTACATTCAATCCTACAAGAGACTCCTCCCTCGGACGCACAAGGACTCCGCCGCCGTCGCCGATGTCTGGCCTTCTACTTCCGCCTTCGATGGCTACTTGTCCGCTCTCTCGCCGCTTCAGCTTGTACGCAGCAACAGTCGGCGGTTTATGCCCTCGCAGGCTGATGAAGAGGCACATCAGTTGTCGTATCTGCAAAAACACTTGGCTAACATAATGTCTCTTCTAGCAGAGCCAGTAGAGGGAGAAGGCGAAGAGTCTCTGGTTTTAACCATGGATAGATTCGAGCATCTTGGGTTTCTATTTCAGTTTGGTGATAAGGGATTGGAAGGAAATTCTTTTAGTCAATGTTCTCCTTTTTTTGCAAACTCGGACCCTGATATGCCTGCTGTTCCTGTTCCTGCTGCCCAAGTTCATGATTGGCTTCTGCAGAATATAGTGGCTACTTTGGAATATATTTCTGAACGAACTTCTTCTAAGGAAAATGGCCCATCTAGTGCCTCTGATCAGGATGTTGCCATGACTGATGCAAGCACTGTGTCAGTTAAGGTCTCAACAAGTACTAGAGGTGCAAGTTTCATTGAAGGGATCTCTAAATCATCATATACGAAGCATGCATCTGACATTAAAGGTTCTTCTGTGAAGGTTCTTAACTGCCACGAGTCTGCCATCTACATCCTAGCACCATTGAGATATGCCACTGTCTATGGATGTTCAGATGCAACAATAGTTCTTGGAGCAGTTGGCAAGGCCGTGAGAGTAGAACACTGTGAACGTGTTCATGTAATTGTAGCAGCAAAACGTATTTGTATTGCTAATTGCCGTGAATGCGTTTTCTTTTTGGGAGTGAATCAGCAACCACTTATGCTCGGTGATAACCATAAGCTGCAGGTGGCTCCCTATAATACTTTTTACTCCCAATTGGAGGAGCATATGAATGAAGTTGGAATTATTCCTACAGTGAACCGATGGGATGAACCTCTCGCATTGGGCATGGTTGATCCCCATGATTCATTATCTCATCCAGCAGGTGTCTCTGATGTTCAAGCTGAGTCTGCTACACAGGTGGACCCAGATCAGTTCACTAGTTTTGTGATTCCAAGCTGGCTTGGAGGAGACTTCACTTGGTCTACAAAAGGCAATCCATTCACGCTACCAGATGCTTATATGGCATCTCAGCATAAAAATCACAAAAATTTAGGGGAGATAAGGCAACTCATACGAGAAGCATCTTTAGAAGAAACTCGCAAACGAGAATTGTCATCTGCACTCCATGTGCACTTCAAGGACTGGTTATATGTTTTATGTTGTGGCAGCTTCTGGAAACATTCGTCAGCTTTATTGTCTGCAAGGCGATTGATCTTTGCCAGATAG 1728 0.4728 MTEPTEPSTSSSLPRDPSTVIHPRREPFEHGLLPIPRLIFSDPAQTLIPLKRKLLQLSSNQRVDSVAISDSLQISIEHARLVLDTLASILHSDSEPLIAAKLGEIDSVGVDVHDLVLFLYIQSYKRLLPRTHKDSAAVADVWPSTSAFDGYLSALSPLQLVRSNSRRFMPSQADEEAHQLSYLQKHLANIMSLLAEPVEGEGEESLVLTMDRFEHLGFLFQFGDKGLEGNSFSQCSPFFANSDPDMPAVPVPAAQVHDWLLQNIVATLEYISERTSSKENGPSSASDQDVAMTDASTVSVKVSTSTRGASFIEGISKSSYTKHASDIKGSSVKVLNCHESAIYILAPLRYATVYGCSDATIVLGAVGKAVRVEHCERVHVIVAAKRICIANCRECVFFLGVNQQPLMLGDNHKLQVAPYNTFYSQLEEHMNEVGIIPTVNRWDEPLALGMVDPHDSLSHPAGVSDVQAESATQVDPDQFTSFVIPSWLGGDFTWSTKGNPFTLPDAYMASQHKNHKNLGEIRQLIREASLEETRKRELSSALHVHFKDWLYVLCCGSFWKHSSALLSARRLIFAR* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00107 575 MobiDBLite consensus disorder prediction 1 21 - -
Lapu1g00107 575 MobiDBLite consensus disorder prediction 1 17 - -
Lapu1g00107 575 Pfam Tubulin binding cofactor C 329 444 IPR012945 -
Lapu1g00107 575 PANTHER UNCHARACTERIZED 17 551 IPR039589 -
Lapu1g00107 575 Gene3D - 309 481 IPR016098 -
Lapu1g00107 575 ProSiteProfiles C-CAP/cofactor C-like domain profile. 282 435 IPR017901 -
Lapu1g00107 575 SMART carp 375 409 IPR006599 -
Lapu1g00107 575 SMART carp 337 374 IPR006599 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00107 Lapu-Chr1 5857121 5872379 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00107 K16810 - gmx:100780410 990.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00107 1 5857121 5872379 Lapu1g00107 1 5857121 5872379 ECH