Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00060 ATGAGCAGCGCCATCTTCAAAGCTTCAACCAGCAATAATCTCCATTCCTCTCTCAGGGCAGCACTCTTCCATTCAACCCCTCCCTTGCAACGTAAACGGCGCAATTTTTGGGACTCCAGAGGCAACAATCATAACTCCAGAAGGTTTAGACGGATGCAAGCAAAGCATAGAGTAATGAGTAGTATCAATGATTACGCAGAATCCCTGTTTCAGAGCTGGAAGCAAGGTATTGATCCGGACGACCTGCGATCAAGTCAAGACGCATCATGGTTTCATAAAAAACAATATTTTGATGGGGGCTCTGGAAGGTACAGGAATGGCAAGCAAGGATCAAATCATCGGTACAGAAGAGATCCTTTGTTTACCGAAGATGATTTTGATGTCGAAACCGTTTTCCGTTCTGCCTTTGGTGGGAATAGATTCTTCTATTGGTCCTTCATCAATGAGGAAAATCCTCAGTGGAGGTCTGAACGCTTTTCTAATTTTGGGAAATCTTGGAACTGGAGACATCGACGGGAAAATGATTATGACTCTTCATCTGAGTCAGATAGTTCTGGCTCCGATTTAGCTCCGGATAGATTAGCCCTTGGATTGAGTGCTTCTGGTCCTCTGAAACTTGAAGATGTAAAAAATGCTTACCGGGCCTGTGCTCTAAAATGGCATCCAGATCGTCATCAAGGCTCTTGCAAGGGAAATGTTCGAAACATTAAGTTCTGTCATTGGTGTGGTGGTTCTACGAAGCATGACATTCCTGAAGGTGAAGAAAAGTTGAGGGCTATATGTACGGTTTGTGGAAAGATTGCTTATCAGAATCCGAAGATGGTAGTTGGCTGCCTCGTTGAACATGATAACAAGGTCCTCCTTTGCAAGAGAAATATTCAACCATCTCATGGCCTTTGGACACTTCCTGCTGGTTATTTGGAAATTGGAGAGTCGGCTGTGGATGGTGCCATAAGGGAAACAAGGGAGGAAGCGAATGCAGATGCAAAGCTGAAGAACCCCCATTTTTCACCTGGTCCGGAATCATCAGCATGCCAACTTTTTCCACTTGATGATATACCTTTTAATTCTCTATCCTTTTCATCAATGGTGGTTACCTTAAGTTTGTATGTTGAGGATGTTAAGACTGGAAAACTCAAATTCCATTATGGAACCATTAACAAAAGGTCCAGTCTGTCATGGGATAAATGTTAG 1194 0.433 MSSAIFKASTSNNLHSSLRAALFHSTPPLQRKRRNFWDSRGNNHNSRRFRRMQAKHRVMSSINDYAESLFQSWKQGIDPDDLRSSQDASWFHKKQYFDGGSGRYRNGKQGSNHRYRRDPLFTEDDFDVETVFRSAFGGNRFFYWSFINEENPQWRSERFSNFGKSWNWRHRRENDYDSSSESDSSGSDLAPDRLALGLSASGPLKLEDVKNAYRACALKWHPDRHQGSCKGNVRNIKFCHWCGGSTKHDIPEGEEKLRAICTVCGKIAYQNPKMVVGCLVEHDNKVLLCKRNIQPSHGLWTLPAGYLEIGESAVDGAIRETREEANADAKLKNPHFSPGPESSACQLFPLDDIPFNSLSFSSMVVTLSLYVEDVKTGKLKFHYGTINKRSSLSWDKC* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00060 397 Gene3D DnaJ domain 196 236 IPR036869 -
Lapu1g00060 397 SUPERFAMILY Chaperone J-domain 135 227 IPR036869 -
Lapu1g00060 397 ProSiteProfiles Nudix hydrolase domain profile. 271 387 IPR000086 -
Lapu1g00060 397 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 271 331 - -
Lapu1g00060 397 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 332 396 - -
Lapu1g00060 397 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 8 232 - -
Lapu1g00060 397 MobiDBLite consensus disorder prediction 33 53 - -
Lapu1g00060 397 SUPERFAMILY Nudix 237 371 IPR015797 -
Lapu1g00060 397 CDD DnaJ 206 228 IPR001623 -
Lapu1g00060 397 Pfam NUDIX domain 275 330 IPR000086 -
Lapu1g00060 397 Pfam Nudix N-terminal 237 270 IPR029401 -
Lapu1g00060 397 Gene3D - 237 270 - -
Lapu1g00060 397 ProSitePatterns Nudix box signature. 305 326 IPR020084 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00060 Lapu-Chr1 4358384 4365599 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00060 K18453 - gmx:100807880 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00060 1 4358384 4365599 Lapu1g00060 1 4358384 4365599 ECH