Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00059 ATGGAGAAGATGGAGCATTTCAGCCATATCCACCCTCTTCTGTTAAAGCAGGAAAAGACAAATAACAACGACCGAGTCCTTTGCTCAGGTTGTGAAAAACCAATTTCAGGTCCTTCCTTCAGCTGCGAACAATGCAACTATATCCTTCACAAAACATGTGCAGAAATGGCACGCCATGTGAAACACCCATTTCACCCTGAACACCCCCTTGTTCTCCTTTCCACTTCCCCTTATGAGGGACGCTATATATGTGATTCCTGTAGAGGCCTCTTCCGAAACTTCGTGTACCATTGTTATATCTGCAGTTATGACCTTGACGTGTCATGTGCTGCTCAGTGCAACCCGGATGATGGCCATAAGCACGAGTTCATGTCAATGACGAATCCACAATCGTTTGTTTGTTATGCTTGTGGCTTGCAAGGAAACGAGGATCTCGCTTGCCTATGCACCATTTGTCAGATTTGGGTTCATTCTAGCTGTGCTGAATTGCCTCTTGCTGTTAGAATAAAAAGCCATGACCACCCTTTGAAGCTCACTTATGCCCTTCATCACGTTTTTGGTTTCTGGGGTAACATAACTTGTGGTGTTTGTAATGGACCAATGAGTGCAGCTTTTGCGGGTTACTTTTGTTCAACGTGCAGATTTCCCGTGCATTTGAATTGTCTACAACACGATTTAAGAAATGAGTGGGAGGCCGCAACAGAAGACGAGGAATCCTTGGATATTGATTTTACTTGTAGTTTCTTTGGTCATGAACATTTGTTGAAGTTGGTTGGTGAAGAGACTGATATGCAATATTCTGGTAAACTCTGTGATGGGTGTATCCAACCCATCACGCCACCTTTACTTTCTTGTGAAGAAGAAAATTGTGGCTTCATTTTGCACCAAAGTTGTGTTGAATTGCCAAGAACAAAGCTACACCCGTTTCATGCACACCCTCTAACTCTTCTCTCCAAGGCACCAAATTATGATGGCATTTACAGGTGCGATGGATGCAAAAGATTGAGCAATGGTTTTGTGTATCGATGTGATATGTGTCAATTCGACCTAGATGTTTGTTGTGGTTCCCTTGAAGAGAGAATTGAACATGAAAGTCACATGCATACCCTGCTCTTCAAGAAGACAACCGTTGCTAGGCAATGCAAAGGTTGTCATCGTTGGTCGAAGCATGTGTTTGTATGTGATGTTTGTGAGGATTTTGCCATTGATTGTGAATGTGCTACTCTACCTCGTAAGGCATGGCACTTGTATGACAAGCATCCTCTAAGTCTAAACTATTTAGTTGAAGAGGGTTTGAGGGAATATGAATGTGGCATTTGCAATGAGAAAACTTGTCCGAAGCAATGGTTTTATTACTGCGATGACTGTAATTCTGGTGCTCATCCATACTGTGTTGAAGGCAAGTCTAGGCGTGTCAAGTTCGGAGGTAGTTTCCAATATGATGTCCATCCACACCCTCTTGCTTTGGTTGAAGAAACTCAGGAAAACACTAAATGTGAAGCCTGTGGTGAATGCTGCAATGGCTGGACACTTGAATGTGGCCAATGCGAAAGCTACTTTCATCGTGAAGGACAGTGTTTTTGGAAAGGATTCAAAAAGAGCGCAAAGTATTTAGTGTTGTCAGGGGTTATGAGGCACAGGTATGCTGCAAACGTGTTAGCCTCCACGCCCAATGTAACCACAAAGTGA 1689 0.4322 MEKMEHFSHIHPLLLKQEKTNNNDRVLCSGCEKPISGPSFSCEQCNYILHKTCAEMARHVKHPFHPEHPLVLLSTSPYEGRYICDSCRGLFRNFVYHCYICSYDLDVSCAAQCNPDDGHKHEFMSMTNPQSFVCYACGLQGNEDLACLCTICQIWVHSSCAELPLAVRIKSHDHPLKLTYALHHVFGFWGNITCGVCNGPMSAAFAGYFCSTCRFPVHLNCLQHDLRNEWEAATEDEESLDIDFTCSFFGHEHLLKLVGEETDMQYSGKLCDGCIQPITPPLLSCEEENCGFILHQSCVELPRTKLHPFHAHPLTLLSKAPNYDGIYRCDGCKRLSNGFVYRCDMCQFDLDVCCGSLEERIEHESHMHTLLFKKTTVARQCKGCHRWSKHVFVCDVCEDFAIDCECATLPRKAWHLYDKHPLSLNYLVEEGLREYECGICNEKTCPKQWFYYCDDCNSGAHPYCVEGKSRRVKFGGSFQYDVHPHPLALVEETQENTKCEACGECCNGWTLECGQCESYFHREGQCFWKGFKKSAKYLVLSGVMRHRYAANVLASTPNVTTK* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00059 562 SMART PHD_3 133 214 IPR001965 -
Lapu1g00059 562 SMART PHD_3 270 333 IPR001965 -
Lapu1g00059 562 SMART PHD_3 27 88 IPR001965 -
Lapu1g00059 562 SMART PHD_3 436 503 IPR001965 -
Lapu1g00059 562 SUPERFAMILY Cysteine-rich domain 284 368 IPR046349 -
Lapu1g00059 562 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 11 90 IPR013083 -
Lapu1g00059 562 SUPERFAMILY Cysteine-rich domain 386 469 IPR046349 -
Lapu1g00059 562 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 3 111 - -
Lapu1g00059 562 SUPERFAMILY Cysteine-rich domain 146 224 IPR046349 -
Lapu1g00059 562 SUPERFAMILY Cysteine-rich domain 31 111 IPR046349 -
Lapu1g00059 562 Pfam C1 domain 308 354 IPR004146 -
Lapu1g00059 562 Pfam C1 domain 250 299 IPR004146 -
Lapu1g00059 562 Pfam C1 domain 7 54 IPR004146 -
Lapu1g00059 562 Pfam C1 domain 63 110 IPR004146 -
Lapu1g00059 562 Pfam C1 domain 170 221 IPR004146 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00059 - - vun:114181199 1092.8