Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00057 ATGGGATCACCACAGAAGGACCCAAATGTTTTCCACTTTAGCCATCCACATCCTTTGGAATGCACCACCCCACCCTCCACACCAAATATTGTTCTCTGCTTTGGATGCAAGCTAAAAGTTAAGTGTGGTGAGGACTATTACCAGTGCAAAACATGTACTTTCTCTCTTCACCATGTCTGCTACAAGATGCCCTTAACCACAAACCACCCTTCACATCCAACCCACGATCTACTTCTCCTTGTTATACCTTCCACCAAACCCACTCCCAACTGTGTGGCATGTGGGCACCATGTCATGGGCTTCTGCTACCACTGTGCTCAATGCAGTATCTTCTTTCATGCCTTGTGTCTTGCACTCCCCGTGTCCCTTGCAATCACATACCATCCCCACAAAATCAAACTTGAGTTTTCACCACCCTATGAGTTCTTCTGTGACTTGTGCAACAAGCCCAGCAATTACAATAACCGGTGGCTCTATAGGTGCAACATGTGTGAATTCGACACACATATAGCTTGTGCCATCGACAACCTAGAGCCCCATCTGTTTCAAAATCCATCTTTCCCTCAATCAAGCCCTCTGTTAAGGCAACTTACTAGTCACCAAGTGGAACACAGAAAATTCAGTGCAAGTGTAGGTGATAGATTCGAAGGGTATGAGTATGAGATCATAAGTTTGGTGGCACAACAAATTGGAGGGGCAACCAGAAAAAACTTTGATAGTGCAACGGCTGGATGGGACAAGAGATTGTATAGTAGTCCAAGAAAAAAGCATAACATAACTGAGAGTGAGAAGATGAAGATTGTTGAACTTGAATTACAAGGAAAGGAATTAAGCCCTGCTGGGCTTTTATCAAAATTAGAAGAAAGAACACCACTTCGGGATAAATGGACTCCATTTTCTGATCATTCGAGCACACCGTTCAGTAACCAATACAGTGACTCATATTTTTCAATAGATTTGGCAAAGTCATATTCTGCTCATGCACGTAGAAGTCAGGTACAAAAAGAAGGTGGTAGTGACCAGATAACACGAGCTGCTAACGTTGCAAGCAATTGTGGACAACGTGAAGAACCATTCGTTCTAGTTAACAATAAGCTGAACACAGCTATATTCATCAAAGAAGCACGAACCAGTGATGGTGGAAAATCGAGCCAGAGAGATATGATGAAAAATCCTAATGAAATCCACGCTAAACGGTCTGTTCAAGATCAAACAGTTGCTATATCGGAGACAGTGAAAACAGCAAGCTAA 1251 0.4293 MGSPQKDPNVFHFSHPHPLECTTPPSTPNIVLCFGCKLKVKCGEDYYQCKTCTFSLHHVCYKMPLTTNHPSHPTHDLLLLVIPSTKPTPNCVACGHHVMGFCYHCAQCSIFFHALCLALPVSLAITYHPHKIKLEFSPPYEFFCDLCNKPSNYNNRWLYRCNMCEFDTHIACAIDNLEPHLFQNPSFPQSSPLLRQLTSHQVEHRKFSASVGDRFEGYEYEIISLVAQQIGGATRKNFDSATAGWDKRLYSSPRKKHNITESEKMKIVELELQGKELSPAGLLSKLEERTPLRDKWTPFSDHSSTPFSNQYSDSYFSIDLAKSYSAHARRSQVQKEGGSDQITRAANVASNCGQREEPFVLVNNKLNTAIFIKEARTSDGGKSSQRDMMKNPNEIHAKRSVQDQTVAISETVKTAS* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00057 416 MobiDBLite consensus disorder prediction 398 416 - -
Lapu1g00057 416 Pfam C1 domain 13 60 IPR004146 -
Lapu1g00057 416 Pfam C1 domain 70 116 IPR004146 -
Lapu1g00057 416 Pfam C1 domain 127 173 IPR004146 -
Lapu1g00057 416 SUPERFAMILY Cysteine-rich domain 41 130 IPR046349 -
Lapu1g00057 416 SUPERFAMILY Cysteine-rich domain 127 174 IPR046349 -
Lapu1g00057 416 MobiDBLite consensus disorder prediction 379 397 - -
Lapu1g00057 416 PANTHER PHORBOL-ESTER/DAG-TYPE DOMAIN-CONTAINING PROTEIN 11 293 - -
Lapu1g00057 416 MobiDBLite consensus disorder prediction 377 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00057 Lapu-Chr1 4315816 4318111 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00057 - - pvu:PHAVU_001G142900g 724.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00057 1 4315816 4318111 Lapu1g00057 1 4315816 4318111 ECH