Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00049 ATGTCTGTAATAGGGGCGTTTTCACAGTTTGTGTATGGAGAGGTTTATCAGAGAGATGAACAGTGGGCACAGTGCTTGGTAAGTGGGAGAGGGTATCTGCTTTATCAGAAGAGTGGATGTGAGAACCTGTGGATTGGAAGCAGAAAGAGAGAAAGGAAGATGAAAAGGAGAAATCTGCGTGTGGAAGCTATGTGGCCAGATTTGTCAAGACCAAGTGAGGTTGAGATGGAAGAAATCAATGATTCTGATCACCTTGATCAAGTTCTTCTTCTTGCTCACAACAACTCACAACCTATCCTCATTGATTGGATGGCTACTTGGTGCCGGAAATGCATCTATATGAAGCCCAAGTTGGAAAAATTAGCAGCTGAATATCACAACAAAGTCAAATTTTATTACGTAGATGTGAATAAAGTACCCCAGACTCTGGTCAAGCGAGGCAACATATCTAAAATGCCAACAATTCAGCTGTGGAAAGATGGAGAGATGAAAGCAGAAGTTATTGGAGGCCATAAGGCCTGGCTAGTTACTGAAGAAGTCAGAGAAATGATCCAAAAGTTTTTGTGA 567 0.418 MSVIGAFSQFVYGEVYQRDEQWAQCLVSGRGYLLYQKSGCENLWIGSRKRERKMKRRNLRVEAMWPDLSRPSEVEMEEINDSDHLDQVLLLAHNNSQPILIDWMATWCRKCIYMKPKLEKLAAEYHNKVKFYYVDVNKVPQTLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVTEEVREMIQKFL* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00049 188 ProSiteProfiles Thioredoxin domain profile. 59 188 IPR013766 -
Lapu1g00049 188 Pfam Thioredoxin 94 172 IPR013766 -
Lapu1g00049 188 Gene3D Glutaredoxin 66 187 - -
Lapu1g00049 188 PANTHER THIOREDOXIN-LIKE 3-2, CHLOROPLASTIC 45 187 IPR044253 GO:0009570
Lapu1g00049 188 CDD TRX_family 94 185 - -
Lapu1g00049 188 FunFam Thioredoxin 72 188 - -
Lapu1g00049 188 SUPERFAMILY Thioredoxin-like 73 184 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00049 Lapu-Chr1 4195175 4199088 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00049 - - gmx:100811965 325.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00049 1 4195175 4199088 Lapu1g00049 1 4195175 4199088 ECH