Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00048 ATGGCCCGTTACGGCGAGGGCGACAAGCGGTGGATCGTGGAGGACCGCCCCGACGGCACCAACGTCCACAACTGGCACTGGTCCGAGACCAACTGTCTCGAATGGTCCAGAACCTTCTTCTCCTCCCTCCTTTCCAACCTCACAATTCTTGACGGCGAGGGAAACCTCTTCGTCAAAACCACCACCCTGCGCTCCCTCGACGGCGAGGCCTACGTCAACCTCCGCAAGGGAAAAATCATCCCCGGCTACGAGATCAGCCTCACGCTCAATTGGCACGGCGAGGCCAAGGACTCTAACGGAGATTCGCTTCTCCAAGTCGACGGCGCCGTCGAAATCCCCTACATCTCCGATGAGAACGCCGACGAGGATCCCGAGCTCAAAATCACCGTCAACGACGAAGGACCGGTGGGGAAGAGGATCAAGGACGCAATGCTTTCCAAAGGGAAGCCCTTGATCTTGGAGAAGGTTAGGGTTTGGGTGGAGAGCATGGCAAAAGGCGGTCCCGTTAAGGACGAATTAGACAACAAGAAGACGGCGCCGCCTCCATCGCCATCACCGGCGCCGTCTCCGGCGCCTACTACTACGGCTGCGCCGAAGAAGGAGAGTTCGGCGGGTACGAAGAAGAAGGAGAAGAAGGGAGTGAAGAGTATCAGCATGACGGAGAGGTTTAATTGCAGGGCGAAAGATTTGTTTGAGATATTGATGGATGAGAATAGGTGGAAGGGTTTCACGCAGAGCAATGCGAGGATTAGTAAAGAGGTTGGTGGTGAGTTTAGCATTTTTGATGGATCGGTGACTGGAACTAATTTGGAGTTGCAGGAGGGTAAGTTGATTGTGCAGAAATGGAGGTTCGGAAGCTGGAACGATGGAGTTCAATCCACGGTGAGGCTTGTGTTTGAGGAGCCTGAAGCGGGTGTTACGGTTGTTAAGCTCACGCATACTGATGTGCCTGAAGAGGATAGGTATGGGAATGCAACTGTGGTGGAGAACACCGAAAGGGGGTGGCGGGATCTTATTTTCCAGAGGATACGTGCGGTTTTTGGTTTTGGAATTTGA 1056 0.5398 MARYGEGDKRWIVEDRPDGTNVHNWHWSETNCLEWSRTFFSSLLSNLTILDGEGNLFVKTTTLRSLDGEAYVNLRKGKIIPGYEISLTLNWHGEAKDSNGDSLLQVDGAVEIPYISDENADEDPELKITVNDEGPVGKRIKDAMLSKGKPLILEKVRVWVESMAKGGPVKDELDNKKTAPPPSPSPAPSPAPTTTAAPKKESSAGTKKKEKKGVKSISMTERFNCRAKDLFEILMDENRWKGFTQSNARISKEVGGEFSIFDGSVTGTNLELQEGKLIVQKWRFGSWNDGVQSTVRLVFEEPEAGVTVVKLTHTDVPEEDRYGNATVVENTERGWRDLIFQRIRAVFGFGI* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00048 351 MobiDBLite consensus disorder prediction 167 216 - -
Lapu1g00048 351 PANTHER HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1 2 164 IPR015310 GO:0001671|GO:0051087
Lapu1g00048 351 SMART Aha1_N_2 29 165 IPR015310 GO:0001671|GO:0051087
Lapu1g00048 351 MobiDBLite consensus disorder prediction 202 216 - -
Lapu1g00048 351 SUPERFAMILY Bet v1-like 216 350 - -
Lapu1g00048 351 SUPERFAMILY Activator of Hsp90 ATPase, Aha1 20 165 IPR036338 -
Lapu1g00048 351 Gene3D - 214 350 IPR023393 -
Lapu1g00048 351 Gene3D - 18 174 IPR036338 -
Lapu1g00048 351 CDD SRPBCC_Aha1 216 349 - -
Lapu1g00048 351 Pfam Activator of Hsp90 ATPase, N-terminal 29 165 IPR015310 GO:0001671|GO:0051087
Lapu1g00048 351 MobiDBLite consensus disorder prediction 179 193 - -
Lapu1g00048 351 Pfam Activator of Hsp90 ATPase homolog 1-like protein 227 347 IPR013538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00048 Lapu-Chr1 4191903 4193617 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00048 K26216 - gmx:100812897 605.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00048 1 4191903 4193617 Lapu1g00048 1 4191903 4193617 ECH
Lapu1g00048 1 4191903 4193617 Lapu7g00186 7 2034334 2036865 PCT