Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00046 ATGATGGAGGAAGAAGAGGACCAACAGAAGCTTTCAGATCTGGTGAAGGAGCTAGTCCACCGTTTGCTCTCCCAAAACCTCCCCTCCAATTCGCCGCCGCTAAACCCTAACTCTCCCGAATTCCGCAACTCTCTCCGCTACGCCCTCCGCATCCTCTCCAGTCGCCTCACTCCCTCCGTCGCCCCAGACGCAGCCGCCATCGCCGACTCCATCAAACGCCGCCTCGCCACCCACGCCCGCTCCGCCGACGCCCTCTCCTTTGCCGACCTATTCTCCAAATTCGCCTCCAAAGCCCAAAGCGTCAACAACAAATGGGCCGTCATCTACCTCCTCAAAATCATCTCCGAAGATCGCCACAAAACCGCCGCCGCCGCTACCACCACCACACCTCTGTTGCCCAACCTCGCTTTCTCAGAACCCGCTTCGAACAAAGGCTGGAGCAACGGCGTTTTACTTGTCTCTAAGGATCCCGAGAACCGCCGCGACGTCGCCTTTCGCGAGTTCGTGAATTTGGTCAAGGAAGAAAACGAGGTGTCGGAAGAGGTTATCGTCAGGGACGTGCTCTATGCTTGTCAGGGGGTTGATGGTAGGTTTGTGAAATTCGAGAGTGAGAGTAAGCGTTATGCGATACCCGATTCGGCTAGGGTTCCGAGAGCCACTAGGAGTATGGTTCATAACCTTTGTGAATTGGGTGTTTTGTTTCGGAAGGTTAGTGGTTACATTTCGCAGAGTATGGATCGGTTTCCCAATGAAGATGTGGGAACTGTGGGGCAAGCTTTTTGCTCCGCTTTGCAGGATGAGCTTAGTGAGTACTATAAGTTGTTGGCGATTCTTGAGGCTCAGGCTTCGAACCCGATTCCTTTGGTCTCCGAATCTGCGAGTTCTGGGAACTATCTATCGCTGAGGAGATTGGCCGTTTGGTTGGCTGAGCCAATGGTGAAGATGAGGCTGATGGCGGATTTGGTTGAGAAGTGTAGGGTTTTGCGTGGCGGGGCTATGGCGGGGGCGATTCATTTGCACGCACAGCACGGTGATCCGTTGGTTCATGAGTTTATGAGGAGGTTGCTGCAGAGAGTGTGTTCTTCGCTGTTTGAGATGGTGAGGAGGTGGGTTTTGGAAGGGGAATTGGAGGATATATTTGCCGAGTTTTTCATTGTTGGGCAGCCTGTTAAGGCTGAGTCACTTTGGAGAGAAGGGTATAGACTTCATCATGCGATGCTTCCTTCGTTCATTCCGCCTTCACTTGCGCAGAGGATCTTGAGGACTGGCAAGTCGATTAATTTTCTTCGCGTTTGTTGTGAGGATCGCGGTTGGGCGGAAGCTGCGACTGAGGTTATCACTGATAATGAAGTGACAGCTAGAAGAGGCGGTTTTGGATATGGGGAAACGGATACCCTTGAGTTTTTGGTAGATAAAGCTGCAAAAAGGATTGACAAACATTTGTTGGATGTGATTTTCAAGAGGTACAAGTTCAAAGAACACTGTCTTGCAATTAAGCAGTATTTGTTGCTTGGCCAAGGTGATTTTGTGCAGTATCTGATGGATATTGTGGGACCTGAGCTTTCTGAGCCAGCTAACACTATTAGCTCTTTCAAACTTTCGGGATTGCTTGAAACTGCAATTAGGGCATCTAATGCTCAGTATGACGATCCTGACATTTTGGATAGGCTCCGGGTTAAAATGATGCCACATGAGAGCGGTGATAGGGGCTGGGATGTATTTTCATTGGAATATGATGCAAGGGTTCCACTTGATACAGTGTTCACAGAGTCTGTGATGGCGAGGTATTTAAGAATTTTTAATTTTCTGTGGAAGCTTAGAAGAGTGGAACACGCGCTTACTGGTGCCTGGAAGACCATGAAACCAAACTGCATTACGTCTAATTCCTTTACCAGATTGCAACATGCAGTAAAGATGCAGTTAGTTTCAACATTGAGGCGCTGTCAGGTTCTTTGGGTTGAAATTAATCACTTCATTTCAAACTTGCAATATTATATAATGTTTGAAGTGTTGGAGATATCTTGGTCAAATTTTTTGGCGGAGATGGAAGTAGCCAAGGATCTTGATGATCTACTTGCAGCTCATGAGAAATATCTGCATTCTATTGTCGAGAAATCTCTCCTTGGAGACCTTTCCCAGTCTCTTTACAAGTCACTACTTGTAATTTTTGATCTTATATTACGTTTTCGGAGCCGTGCAGATCGATTGTATGAAGGTATTCATGAGTTGCAAGCAAGAATCACTGAATCCTCCCTATCCTCTCGAGACCAAAATAAAACACGGTCACGAAAGCTGCTGAATGATAAAACTGCAGAACTAGAATCTTGGGTTGTTGATGGGAGGAAAGCCCTAACACAACGTGCTAGTGAGTTTCTACGAAATATGGGGCAAGATCTTGATGCAATTGCTAAGGAGTATTCATCGTTGCAAGAGGAATTCATTTCTCAGTTGCCTGTACAGCAGCATGTTGATCTAAAATTTCTCTTTTTCCGTCTTGACTTCAACGAATTTTATAGGCGGTTGTGTCCTAGCATGTAG 2538 0.4716 MMEEEEDQQKLSDLVKELVHRLLSQNLPSNSPPLNPNSPEFRNSLRYALRILSSRLTPSVAPDAAAIADSIKRRLATHARSADALSFADLFSKFASKAQSVNNKWAVIYLLKIISEDRHKTAAAATTTTPLLPNLAFSEPASNKGWSNGVLLVSKDPENRRDVAFREFVNLVKEENEVSEEVIVRDVLYACQGVDGRFVKFESESKRYAIPDSARVPRATRSMVHNLCELGVLFRKVSGYISQSMDRFPNEDVGTVGQAFCSALQDELSEYYKLLAILEAQASNPIPLVSESASSGNYLSLRRLAVWLAEPMVKMRLMADLVEKCRVLRGGAMAGAIHLHAQHGDPLVHEFMRRLLQRVCSSLFEMVRRWVLEGELEDIFAEFFIVGQPVKAESLWREGYRLHHAMLPSFIPPSLAQRILRTGKSINFLRVCCEDRGWAEAATEVITDNEVTARRGGFGYGETDTLEFLVDKAAKRIDKHLLDVIFKRYKFKEHCLAIKQYLLLGQGDFVQYLMDIVGPELSEPANTISSFKLSGLLETAIRASNAQYDDPDILDRLRVKMMPHESGDRGWDVFSLEYDARVPLDTVFTESVMARYLRIFNFLWKLRRVEHALTGAWKTMKPNCITSNSFTRLQHAVKMQLVSTLRRCQVLWVEINHFISNLQYYIMFEVLEISWSNFLAEMEVAKDLDDLLAAHEKYLHSIVEKSLLGDLSQSLYKSLLVIFDLILRFRSRADRLYEGIHELQARITESSLSSRDQNKTRSRKLLNDKTAELESWVVDGRKALTQRASEFLRNMGQDLDAIAKEYSSLQEEFISQLPVQQHVDLKFLFFRLDFNEFYRRLCPSM* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00046 845 Coils Coil 261 281 - -
Lapu1g00046 845 Pfam Gamma tubulin complex component N-terminal 184 487 IPR041470 -
Lapu1g00046 845 Pfam Gamma tubulin complex component C-terminal 493 838 IPR040457 GO:0043015
Lapu1g00046 845 Gene3D - 492 837 IPR042241 -
Lapu1g00046 845 PANTHER GAMMA TUBULIN COMPLEX PROTEIN 10 838 IPR007259 GO:0000226|GO:0000922|GO:0005815|GO:0007020|GO:0043015
Lapu1g00046 845 Coils Coil 792 812 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00046 Lapu-Chr1 4178378 4183097 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00046 K16570 - gmx:100784710 1520.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00046 1 4178378 4183097 Lapu1g00046 1 4178378 4183097 ECH