Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01422 ATGGCTTTCACCAGCCAACGAAAACAGAACATGTTTGCCATATTCCTCCTCCTCCTTGCAGTTGGGATTTCCCAAGTGATGTCCCGAAAACTGCATGGAACATCCTTGAGAGAAAGACATGAAAAATGGATAATAGAACACGGCAAAGTGTATAAGGATGCTGCAGAGAAGGAAAAACGTTTCCAGATATTCAAGGACAATGTGGAGTTCATTGAATCATCAAATGCTGCTGGCAACAAACCTTACCAGCTTGGTGTTAATCACTTTGCTGACCTCACACTTGAGGAATTCAAGGCTTCACGTACTGGACTCAAGAGCCCTCCTGAGTTCATCACAACACCATTTAAGTATGAAAACGTGAATGCTATTCCTGAAGCTGTAGATTGGAGGGAAAAAGGAGCTGTTACTCAAGTCAAAGACCAAGCTGATTGTGGGAGCTGCTGGGCATTTTCAACCGTGGGTGCAATTGAGGGTATCCACCAAATAACCACAGGTAATCTGGTGTCCCTTTCAGAGCAAGAGCTAGTGTCTTGTGACACAAAAGGTAAAGACCAAGGGTGTGAAGGGGGTTACATGGAAGAAGCATTTGAATTCATCATAAAAAATGGTGGAATCACAAGTGAGGCTAACTACCCCTACAATGCAGTTAATGGGACATGTGAGGTAGCAGCCTACCCAGTGGTTCAAATCAAGGGATATGAGAGAGTTCCTCCAAATAGTGAGAATGCACTCATGATAGCTGTGGCCAACCAACCAGTTTCGGTTTCCCTTGATGCAGAGAATAGAGATTTCATGTTATATGCTGGAGGGGTTTACACAGGAAACTGTGGAACTGAGCTAAACCATGCTGTTACAGCAGTGGGTTATGGCACAGAAAATGACACTGACTATTGGCTATTGAAGAATTCATGGGGCACAGGTTGGGGTGACAAAGGATACATAAAGATGCAACGTGGTGTAGCTGCAAAGCAAGGTTTATGTGGAATTGCCATGGATTCATCTTATCCAACGGCCTGA 1017 0.4415 MAFTSQRKQNMFAIFLLLLAVGISQVMSRKLHGTSLRERHEKWIIEHGKVYKDAAEKEKRFQIFKDNVEFIESSNAAGNKPYQLGVNHFADLTLEEFKASRTGLKSPPEFITTPFKYENVNAIPEAVDWREKGAVTQVKDQADCGSCWAFSTVGAIEGIHQITTGNLVSLSEQELVSCDTKGKDQGCEGGYMEEAFEFIIKNGGITSEANYPYNAVNGTCEVAAYPVVQIKGYERVPPNSENALMIAVANQPVSVSLDAENRDFMLYAGGVYTGNCGTELNHAVTAVGYGTENDTDYWLLKNSWGTGWGDKGYIKMQRGVAAKQGLCGIAMDSSYPTA* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01422 338 SMART pept_c1 123 337 IPR000668 GO:0006508|GO:0008234
Lapu11g01422 338 Gene3D Cysteine proteinases 23 338 - -
Lapu11g01422 338 SUPERFAMILY Cysteine proteinases 33 337 IPR038765 -
Lapu11g01422 338 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 31 331 IPR013128 GO:0008234
Lapu11g01422 338 Pfam Cathepsin propeptide inhibitor domain (I29) 40 97 IPR013201 -
Lapu11g01422 338 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 297 316 IPR025661 -
Lapu11g01422 338 PRINTS Papain cysteine protease (C1) family signature 141 156 IPR000668 GO:0006508|GO:0008234
Lapu11g01422 338 PRINTS Papain cysteine protease (C1) family signature 282 292 IPR000668 GO:0006508|GO:0008234
Lapu11g01422 338 PRINTS Papain cysteine protease (C1) family signature 297 303 IPR000668 GO:0006508|GO:0008234
Lapu11g01422 338 CDD Peptidase_C1A 124 336 IPR039417 -
Lapu11g01422 338 Pfam Papain family cysteine protease 123 336 IPR000668 GO:0006508|GO:0008234
Lapu11g01422 338 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 280 290 IPR025660 -
Lapu11g01422 338 SMART Inhibitor_I29_2 40 97 IPR013201 -
Lapu11g01422 338 FunFam Senescence-specific cysteine protease SAG39 21 338 - -
Lapu11g01422 338 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 141 152 IPR000169 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01422 Lapu-Chr11 16959822 16961976 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01422 - - gmx:100802616 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g01422 11 16959822 16961976 Lapu11g01422 11 16959822 16961976 ECH