Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01421 ATGAATTCTAAACATGCTATAGAATATTTAAATGTGGATCATGGATGTGATGGAGGTCTCATGGAAGATGGTTTCGAATTCATTATAAAAAATGGTGGAATCACGAGTGAGGAAAATTACCCGTACACTGGAGTTAATGAGACTTGTGACACAAACAAAGAGGCTTCTCCTGAAGCTCAAATAAAAGGGTATGAAACAGTACCTGCAAATAGTGAGGAAGCACTACAGAAAGCAGTTGCAAACCAACCAGTGTCAGTTAGCATCGATGCTGGAGGATCTGCTTTCCAATTTTACTCAAGTGGGGTTTTCACTGGACAATGTGGAACTCAACTAGATCATGGTGTCACTGCAGTTGGCTATGGTAGCACCGATAATGGTACTGAGTATTGGATAGTGAAGAATTCATGGGGCACAGAATGGGGTGAAGAAGGATACATAAGAATGGAACGAGGCATAGAAGCCAAAGAAGGCCTATGTGGCATTGCCATGGATGCTTCATACCCAACTGCTTAA 513 0.4172 MNSKHAIEYLNVDHGCDGGLMEDGFEFIIKNGGITSEENYPYTGVNETCDTNKEASPEAQIKGYETVPANSEEALQKAVANQPVSVSIDAGGSAFQFYSSGVFTGQCGTQLDHGVTAVGYGSTDNGTEYWIVKNSWGTEWGEEGYIRMERGIEAKEGLCGIAMDASYPTA* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01421 170 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 111 121 IPR025660 -
Lapu11g01421 170 Gene3D Cysteine proteinases 2 170 - -
Lapu11g01421 170 SUPERFAMILY Cysteine proteinases 7 170 IPR038765 -
Lapu11g01421 170 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 12 163 IPR013128 GO:0008234
Lapu11g01421 170 SMART pept_c1 1 169 IPR000668 GO:0006508|GO:0008234
Lapu11g01421 170 CDD Peptidase_C1A 11 168 IPR039417 -
Lapu11g01421 170 Pfam Papain family cysteine protease 12 169 IPR000668 GO:0006508|GO:0008234
Lapu11g01421 170 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 129 148 IPR025661 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01421 Lapu-Chr11 16952926 16953645 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01421 - - gmx:100817873 304.293
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g01421 11 16952926 16953645 Lapu11g01421 11 16952926 16953645 ECH