Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01420 ATGATGAGTTCATTTAGCCAAAACAACTATATTTTAGTTCTGTTCCTTGTTTTCACTTTGTGGACATGTCATGTAGTGTCTCGCAGGTTGCCTGAGCCTTTCTCATCCGAGAGACACGAGAAGTGGATGGCACACTATGGTAAGGTCTACAAGGATGATGCTGAGAAGGAGAAACGTTTCCAAATATTCAAGAACAATGTGCAGTTCATTGAGTCTTTCAATGCTGCTGGGGACAAACCTTTCAACCTTAGCATTAACCAATTTGCTGACCTTCATAATGAAGAATTTAAGGCTTTACGAATTAATGGTCAGAAAAAGGAACGTAGCGTGCAGACAGCAACAGAAACATCGTTTAGGTATGACAGTGTCACTAAGATTCCTGCTACCATGAACTGGAGGAAAAGAGGTGCTGTTACTCCAATCAAGGACCAAGGCACATGTCGAAGTTGTTGGGCATTTTCAACTGTGGCTACAATTGAGGGTCTCCATCATATAACTAAAGGTGAGTTGGTGTCCCTGTCAGAACAAGAACTAGTAGATTGTGTTAGAGGTGACAGCGACGGATGCAACGGTGGTTATGTGGAAGATGCCTTTGAATTTCTTGCTAAGAAAGGAGGAATAGCAAGTGAAACATACTACCCCTACAAAGGAGTTAACAAGACTTGTAAGGTTAAGAAGGAAAGTCATGGTGTTGCTGAGATTAAAGGGTATGAGAAAGTTCCTGGTAATAGTGAAAAGGCACTCCTGAAAGCTGTGGCACACCAACCAGTGTCAGCTTATGTTGAAGCTGGAGGATCTGCTTTCCAGTTTTACTCAAGTGGGATTTTCACAGGAAAGTGTGGAACTGATATTGATCATTCAGTTACAGTGGTTGGTTATGGAAAAGCTGGTGATGGTACTAAGTATTGGCTAGTGAAGAATTCCTGGGGAACTGAATGGGGTGAGAAAGGATATATAAGGATGAAGCGAGATATACATGCCAAGGAAGGTTTGTGTGGAATTGCTACTAGTGCCTCTTATCCAACTGTTTGA 1032 0.4196 MMSSFSQNNYILVLFLVFTLWTCHVVSRRLPEPFSSERHEKWMAHYGKVYKDDAEKEKRFQIFKNNVQFIESFNAAGDKPFNLSINQFADLHNEEFKALRINGQKKERSVQTATETSFRYDSVTKIPATMNWRKRGAVTPIKDQGTCRSCWAFSTVATIEGLHHITKGELVSLSEQELVDCVRGDSDGCNGGYVEDAFEFLAKKGGIASETYYPYKGVNKTCKVKKESHGVAEIKGYEKVPGNSEKALLKAVAHQPVSAYVEAGGSAFQFYSSGIFTGKCGTDIDHSVTVVGYGKAGDGTKYWLVKNSWGTEWGEKGYIRMKRDIHAKEGLCGIATSASYPTV* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01420 343 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 284 294 IPR025660 -
Lapu11g01420 343 PRINTS Papain cysteine protease (C1) family signature 302 308 IPR000668 GO:0006508|GO:0008234
Lapu11g01420 343 PRINTS Papain cysteine protease (C1) family signature 286 296 IPR000668 GO:0006508|GO:0008234
Lapu11g01420 343 PRINTS Papain cysteine protease (C1) family signature 144 159 IPR000668 GO:0006508|GO:0008234
Lapu11g01420 343 SUPERFAMILY Cysteine proteinases 37 343 IPR038765 -
Lapu11g01420 343 Gene3D Cysteine proteinases 23 343 - -
Lapu11g01420 343 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 37 341 IPR013128 GO:0008234
Lapu11g01420 343 SMART Inhibitor_I29_2 39 96 IPR013201 -
Lapu11g01420 343 FunFam Senescence-specific cysteine protease SAG39 21 343 - -
Lapu11g01420 343 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 302 321 IPR025661 -
Lapu11g01420 343 CDD Peptidase_C1A 127 341 IPR039417 -
Lapu11g01420 343 SMART pept_c1 126 342 IPR000668 GO:0006508|GO:0008234
Lapu11g01420 343 Pfam Cathepsin propeptide inhibitor domain (I29) 39 96 IPR013201 -
Lapu11g01420 343 Pfam Papain family cysteine protease 126 342 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01420 Lapu-Chr11 16928590 16930004 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01420 - - gmx:100817009 604.364