Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01413 ATGATGAGTTCATTTAGCCAAAACAACTATGTTTTAGTTCTGTTCCTTGTTTTCACTTTGTGGACATGTTATGTAATGTCTCGCAGGTTGCCTGAGGCCAGCTTATCAGAGAGACATGAGATGTGGATTGCACAGTATGGTAAGGTTTACAAGGATGCTGCTGAGAGGGAAAAACGGTTCCAAATATTCAAGAACAATGTGCAGTTCATTGAGTCCTTCAATGCTGCTGGGGACAAACCTTTCAACCTCAGCATTAACAAATTTGCTGACCTTCATGATGAAGAATTCAAGGCTTTACTGACTAATGGTCAGAGGAAGGAACAAAGCTTGTGGAAAGCAACAGAAACATCGTTTAGGTATGACAGTGTCACTAAGATTCCTGCTGCTGTGGACTGGAGGAAAAGAGGTGCTGTTACTCCAATCAAGGACCAAGGCACATGTCGAAGTTGTTGGGCATTTTCAACTGTGGCTACAATTGAGGGTCTCCATCATATAACTAAAGGTGAGTTGGTGTCCCTGTCAGAACAAGAACTAGTAGACTGTGTTAGAGGTCACAGCGACGGATGCAATGGTGGTTATGCAGAAGATGCCTTTGAATTTCTTGCTAAGAAAGGAGGAATAGCAAGTGAAACATACTACCCCTACAGAGGAGTAAACAAGAGCTGTAAGGTTAAGAGGGAAATTCATGGTGTAGCTGAGATTAAAGGGTATGAGAAAGTTCCTGCTAATAGTGAAAAGGCACTCCTAAAAGCTGTGGCACATCAACCTGTGTCAGCTTATGTTAAAGCTGGAGGAGGATCCGTTTTCCAATTTTACTCGAGTGGGATTTTGACAGGAAAGTGTGGAACTGATACGGATCATTCTGTTACAGTGGTTGGTTATGGAAATTCCAGAGATGGTACGAAGTATTGGATTGTAAAGAATTCATGGGGAAGTGACTGGGGTGAGAAAGGGTATATAAGGATGAAGCGAGATATACGTGCAAAGGAAGGTTTATGTGGAATTGCTACTAGTGCCTCTTATCCAACTGTTTGA 1035 0.4222 MMSSFSQNNYVLVLFLVFTLWTCYVMSRRLPEASLSERHEMWIAQYGKVYKDAAEREKRFQIFKNNVQFIESFNAAGDKPFNLSINKFADLHDEEFKALLTNGQRKEQSLWKATETSFRYDSVTKIPAAVDWRKRGAVTPIKDQGTCRSCWAFSTVATIEGLHHITKGELVSLSEQELVDCVRGHSDGCNGGYAEDAFEFLAKKGGIASETYYPYRGVNKSCKVKREIHGVAEIKGYEKVPANSEKALLKAVAHQPVSAYVKAGGGSVFQFYSSGILTGKCGTDTDHSVTVVGYGNSRDGTKYWIVKNSWGSDWGEKGYIRMKRDIRAKEGLCGIATSASYPTV* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01413 344 CDD Peptidase_C1A 127 342 IPR039417 -
Lapu11g01413 344 Pfam Papain family cysteine protease 126 343 IPR000668 GO:0006508|GO:0008234
Lapu11g01413 344 SUPERFAMILY Cysteine proteinases 32 344 IPR038765 -
Lapu11g01413 344 SMART pept_c1 126 343 IPR000668 GO:0006508|GO:0008234
Lapu11g01413 344 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 303 322 IPR025661 -
Lapu11g01413 344 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 34 342 IPR013128 GO:0008234
Lapu11g01413 344 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 285 295 IPR025660 -
Lapu11g01413 344 SMART Inhibitor_I29_2 39 96 IPR013201 -
Lapu11g01413 344 Gene3D Cysteine proteinases 23 344 - -
Lapu11g01413 344 FunFam Senescence-specific cysteine protease SAG39 20 344 - -
Lapu11g01413 344 PRINTS Papain cysteine protease (C1) family signature 287 297 IPR000668 GO:0006508|GO:0008234
Lapu11g01413 344 PRINTS Papain cysteine protease (C1) family signature 144 159 IPR000668 GO:0006508|GO:0008234
Lapu11g01413 344 PRINTS Papain cysteine protease (C1) family signature 303 309 IPR000668 GO:0006508|GO:0008234
Lapu11g01413 344 Pfam Cathepsin propeptide inhibitor domain (I29) 40 96 IPR013201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01413 Lapu-Chr11 16633333 16634481 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01413 - - gmx:100817009 568.155