Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01382 ATGGGTTTTCGTTTCCCTGGAATCAGAAAAGCCTCATTTGGTACAAACCAATCATCTCCGAAAGTCGTGGATGTGCCAAAGGGCTACCTTGCTGTGTATGTTGGAAAGGAAATGAAGAGATTTGTTATCCCCGTATCATACTTGAACCAACCGTCCTTTCAGCATTTGTTGAATCAAGCTGAAGAAGAATTCGGGTATGACCATCCAATGGGTGCTCTCACAATACCATGCAAGGAAGATGAGTTCCTAACGGTCACCTCTCACTTTGAATGA 273 0.4359 MGFRFPGIRKASFGTNQSSPKVVDVPKGYLAVYVGKEMKRFVIPVSYLNQPSFQHLLNQAEEEFGYDHPMGALTIPCKEDEFLTVTSHFE* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01382 90 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 18 88 IPR003676 GO:0009733
Lapu11g01382 90 Pfam Auxin responsive protein 17 87 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01382 Lapu-Chr11 16197676 16197952 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01382 15 82 Calmodulin-binding Proteins AT3G43120 57.353 9.45e-21 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01382 K14488 - gmx:100786685 155.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g01382 11 16197676 16197952 Lapu11g01382 11 16197676 16197952 ECH