Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01381 ATGGGTTTTCTTTTACCAGTTATCAGAAAGGCCTTATTTGCATCAAATCATGCATCTTCAAAAGCAGTGGATGCACAAAAGGGCCATCTTGCGGTTTATGTTGGAGAGAAAATGAAGCGCTTTGTGATCCCTGTATCATACTTGAACCAACCATCATTCCAAGACTTGTTGAGTCAAGCTGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGCCTCACAATTCCTTGCAGCGAAGATGTCTTCCAAAGTATAACTTCTTGCTTGAATTGA 273 0.4139 MGFLLPVIRKALFASNHASSKAVDAQKGHLAVYVGEKMKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQSITSCLN* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01381 90 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 19 89 IPR003676 GO:0009733
Lapu11g01381 90 Pfam Auxin responsive protein 17 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01381 Lapu-Chr11 16196212 16196589 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01381 24 89 Calmodulin-binding Proteins AT5G20810 51.515 7.48e-19 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01381 K14488 - gmx:100820621 162.925
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g01381 11 16196212 16196589 Lapu11g01381 11 16196212 16196589 ECH