Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01155 ATGAGTGAGAGTAACGGGAACAGCCGGAGGCGGAATGTTGAAGATCAAGATCTGGGACTCTACTTCTTAGAGGCGTGCAGGGGTAGGGAGATGAAAGAGAGGGTGAAGGAGAAAGAGGAAGGAGAAGAGGAGGAGGAGGAGTCTCCGAGGGAGCTCAACACGATTAACAGCTCTGGTGGCTTCGTGGTGGTGTCCACGGACAAGCTGTCGGTGAAGTACACCAGCGTCAACCTTCACGGCCACGACGTCGGTGTCATTCAGGCCAACAAGCCTGCTCCTACCAAGCGCCTCATCTATTACTTCGAGATTCACGTCAAGGATGCCGGCGTCAAGGGTCAAATTGCCATTGGCTTCACCTCTGAGACATTCAAGATGCGAAGGCAGCCAGGGTGGGAGGCCAATAGCTGCGGCTATCACGGTGACGATGGTCTTCTTTACCGTGGACATGGAAAGGGGGAAGCGTTTGGCCCAACTTATACATCTGGTGATGTAGTTGGTGCCGGAATTAACTACGCTGCGCAGGAATTCTTTTTCACTAAAAATGGCCAAGTTGTCGGCTCTGTTTACAAAGACATGAAAGGCCCCCTTTTTCCTACTATTGCAGTTCATAGCCAAAATGAAGAGGTGCACGTCAACTTTGGGCAGAAACCGTTTACTTTTGACTTAAAAGAATTTGAAGCGCAGGAAAGAATGAAGCAGCAACTGAAAATAGAGGAAATTTCTGTGCCACCAAATGTCAGTTACGGAATTGTCCGCTCCTACCTGCTACACTATGGCTATGAAGATACATTGAATTCATTTGATGTCGCTAGTAAAAGTACCGTTCCTCCTATATACATAGCTCAAGAAAGTGGAACTGATGAGCAGGAAATAACGTATGCGTTAAATCATAGAAAGACTCTTCGCCAGCTAATCAGGAATGGGGACATTGATGTTGCATTTGGTAAATTGCGTGAATGGTATCCACAAATTGTTGAGGACAACACATCAGCTACATGCTTTCTGCTTCATTGTCAAAAATTTATCGAGTTAGTTCGGGTTGGAGCGCTTGAGGAGGCAGTCAAATATGGAAGAATAGAATTGTCAAGTTTTTATGACTTGCCTGTCTTTAAGGATTTAGTTCAGGACTGTGTTGCTTTGTTGGCATATGAACGGCCTCTAGAATCTTCCGTAGGCTATCTTCTAAAAGACTCGCAGCGTGAAGTTGTAGCTGACACGGTAAATGCCATGATATTGTCCACAAATCCCAATATGAAAGAATCAAAACATTGCTTGCAGTCCTATCTGGAGAGGATACTTCGACAGCTAACTGCATGCTGCTTAGAGAGACGATCACTGAATGGAGAGCAGGGAGAGGTTTTCCAACTTCAGAGATTACTTAGCAGTAGTAGAAGAGGCTAG 1401 0.459 MSESNGNSRRRNVEDQDLGLYFLEACRGREMKERVKEKEEGEEEEEESPRELNTINSSGGFVVVSTDKLSVKYTSVNLHGHDVGVIQANKPAPTKRLIYYFEIHVKDAGVKGQIAIGFTSETFKMRRQPGWEANSCGYHGDDGLLYRGHGKGEAFGPTYTSGDVVGAGINYAAQEFFFTKNGQVVGSVYKDMKGPLFPTIAVHSQNEEVHVNFGQKPFTFDLKEFEAQERMKQQLKIEEISVPPNVSYGIVRSYLLHYGYEDTLNSFDVASKSTVPPIYIAQESGTDEQEITYALNHRKTLRQLIRNGDIDVAFGKLREWYPQIVEDNTSATCFLLHCQKFIELVRVGALEEAVKYGRIELSSFYDLPVFKDLVQDCVALLAYERPLESSVGYLLKDSQREVVADTVNAMILSTNPNMKESKHCLQSYLERILRQLTACCLERRSLNGEQGEVFQLQRLLSSSRRG* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01155 466 FunFam Ran-binding protein M homolog 29 228 - -
Lapu11g01155 466 CDD SPRY_RanBP_like 84 214 IPR044736 -
Lapu11g01155 466 SMART toby_final6 348 449 IPR013144 -
Lapu11g01155 466 SMART SPRY_3 96 217 IPR003877 GO:0005515
Lapu11g01155 466 Pfam SPRY domain 98 215 IPR003877 GO:0005515
Lapu11g01155 466 SMART ctlh 294 352 IPR006595 -
Lapu11g01155 466 Gene3D - 27 234 IPR043136 -
Lapu11g01155 466 ProSiteProfiles B30.2/SPRY domain profile. 30 218 IPR001870 -
Lapu11g01155 466 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 294 352 IPR006595 -
Lapu11g01155 466 MobiDBLite consensus disorder prediction 32 56 - -
Lapu11g01155 466 Pfam CTLH/CRA C-terminal to LisH motif domain 296 439 IPR024964 -
Lapu11g01155 466 SUPERFAMILY Concanavalin A-like lectins/glucanases 56 220 IPR013320 -
Lapu11g01155 466 PANTHER RAN BINDING PROTEIN 9-RELATED 49 442 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01155 K23334 - gmx:100805319 853.588