Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lapu11g01147 | ATGAACAAGCTGGTGGTAGAAGTTGTGGATGCAAGCGACCTCATGCCCAAGGACGGGGAGGGGTCAGCCAACCCCTTTGTAGAGGTCAAGTTTGATGAGCAGCAGCACAGCACTGAGACAAAGCACAAAGACCTGAATCCTTATTGGAACCAGAAGCTGGTGTTCGACATCGATAACCCGAGAGATCTTGCGCACAAGACAATTGAAGTGGTTGTATATAATCACAATGATCGGAACCACAACAACTTCCTCGGAAGGGTGAGACTTTCAGGTGCTTCTATCCCTCTATCGGAGTCCCAGGCCCGTGTGGAACGCTACCCACTTGAGAAACGTGGCCTCTTTTCAAACATCAGGGGAGATATTACTCTCAAGTTTTATGCGCTGCATGATCCTCTTCCTTCTCGTCCTCCCCCTCAACCCCAGGACGCCAGTGGCGAGCCTCCTGCTGCTGCTGCTGAACAGCATCACCACCCTCCCCCTCCCCCGCAGGAGGATCACCACACTCCCTTGCAAGAAATAAACCCCAACATGGTGGTCGACGAGGAAAGCGTGGTTGGTGAAGGGGAGGAGAAGAAGAAGAGGAAGATGAAAAAGAAAGAAAAGGAAGTGAGGACTTTTCACTCTATACCAGCTGCGGCTGCCGCAGCCAAGGTCCAGTCCCAGGCGGAGGCGGCAGTGGAAACGGTGAGGAGGGCTGACTTCGCAAAGGCTGGACCACCTAATGTGATGTTGATGCAGATCCCAAAGCAAAACCCCGAGTATGGACTGGTGGAGACAAGTCCTCCTCTGGCGGCTCGTTTGCGGTACAGAGGAAGGGACAAGATATCAACCACCTACGACTTGGTGGAACAGATGCATTACTTGTACGTTAATGTGGTGAAGGCAAGGGATCTCCCCGTGATGGATATCTCCGGAAGCCTTGACCCTTATGTGGAAGTTAAACTCGGTAACTACAAGGGCCTCACCAAGCACTTGGACAAGAATCAGAACCCCGTTTGGAAGCAAATCTTTGCCTTCTCCAAGGAGAGGCTGCAATCAAATTTGCTTGAAGTGACCGTGAAGGACAAGGACATTGGCAAAGATGATTTTGTTGGGAGAGTTATGTTTGATCTGACCGAGGTTCCTCTTCGAGTGCCCCCAGACAGCCCCTTGGCTCCTCAGTGGTACAGATTGGAGGACAAGAAGGGCCAAAAAATTCACAACAACGGCGAAATCATGCTTGCAGTTTGGATGGGAACACAGGCCGACGAGTCCTTCCCGGAGGCCTGGCACTCCGACGCTCACAACGTCAGCCACTCCAACCTTGCAAACACCCGCTCAAAGGTATATTTCTCACCCAAGCTTTTCTATCTTAGAGTTCAAGTCATCGAAGCTCAGGATCTTGTTCCTTCCGATAAAGGAAGAGCCCCGGACGCTGTTGTTAGAGTAAAGCTCGGGAACCAGATGAGATTCACCAGGCCTTCTCAAATGAGAAGCACCAATCCAGTTTGGAACGACGAGCTTATGTTTGTGGCTGCCGAGCCATTTGAGGATTTCATCATTGTGACTGTGGAGGACAAAGTAGGTCCTAGTGCTGAAATCTTGGGAAGGGAGATCATATCAGTTAGAAGTGTTCCACCCAGACACGAGACCAGCAAACTCCCTGATTCTCGTTGGTTCAATTTGCACAGGCCCAGTGCCGTTGGTGAGGAAGAAACGGAGAAAAAGAAGGAGAAATTCTCGAGCAAGATTCACCTCCGAATGTGTCTGGAGGCCGGGTACCATGTGCTGGATGAGTCCACGCATTTCAGCAGTGATCTTCAGCCATCCTCCAAACATTTGAGGAAGAAAAACATTGGTATCCTCGAACTCGGGATACTGAGCGCCCGCAATTTGGTGCCCCTGAAGGCCAGGGAAGGCAGGACCACCGATGCTTACTGCGTGGCCAAGTATGGCAACAAATGGGTCCGAACCAGAACTTTGCTTGACACTCTCTCCCCTCGATGGAATGAGCAATATACGTGGGAGGTTTATGATCCATGCACTGTCATCACAATTGGGGTTTTTGACAACCACCACATCAATGGGAGCAGTGATGCAAAAGATCAGAGAATCGGAAAGGTAAGAATCCGGTTATCAACTCTGGAAACTGACAGGGTTTATACTCATTTTTATCCTCTGCTGGTCCTCCAACCCAATGGCCTGAAGAAGAATGGAGAGCTTCACTTGGCAGTGAGATTCACATGCACGGCTTGGGTGAATATGGTAGCCCAGTATGGCAGGCCTTTGCTTCCCAAAATGCATTATGTCCAACCCATACCTGTTAAGCACATAGACTGGCTCCGCCACCAGGCCATGCAGATTGTGGCAGCTCGCCTATCTAGAGCTGAGCCACCCCTTAGGCGTGAAACAGTTGAGTATATGCTCGACGTGGATTACCATATGTGGAGTCTAAGGAGAAGCAAAGCCAATTTTCATCGCATAATGTCAATCCTCAAAGGAGTTACCGCTGTTTGCAAATGGTTTGATGACATCTGCACTTGGAGAAACCCAATCACAACCTGCCTTGTTCACGTCCTGTTCTTGATACTGGTTTGCTACCCGGAACTGATATTGCCCACCATTTTCCTGTATTTGTTTGTAATTGGGATTTGGAATTATCGGTTCAGGCCAAGGCAACCACCCCACATGGATGCCAGGTTGTCACAGGCAGAAACTGCTCACCCAGATGAACTGGACGAGGAATTTGACACTTTTCCATCTACAAAACCTTCAGATATTGTGAGAATGAGGTATGACAGATTGCGGAGTGTGGCGGGTAGAGTACAGACTGTGGTTGGAGATTTGGCTACTCAGGGAGAAAGAGCTCAAGCCATACTAAATTGGAGGGACTCCAGGGCCACATCTATCTTCATCATCTTCTCACTCATATGGGCCGTATTCATTTACATTACCCCCTTCCAAGTGGTGGCAATTCTCGTAGGCCTTTATATGCTACGTCATCCTCGTTTTAGGAGCAAGATGCCATCAGTACCAGTTAATTTCTTCAAGAGATTGCCTTCCAGATCAGACACGCTTATATGA | 3063 | 0.4943 | MNKLVVEVVDASDLMPKDGEGSANPFVEVKFDEQQHSTETKHKDLNPYWNQKLVFDIDNPRDLAHKTIEVVVYNHNDRNHNNFLGRVRLSGASIPLSESQARVERYPLEKRGLFSNIRGDITLKFYALHDPLPSRPPPQPQDASGEPPAAAAEQHHHPPPPPQEDHHTPLQEINPNMVVDEESVVGEGEEKKKRKMKKKEKEVRTFHSIPAAAAAAKVQSQAEAAVETVRRADFAKAGPPNVMLMQIPKQNPEYGLVETSPPLAARLRYRGRDKISTTYDLVEQMHYLYVNVVKARDLPVMDISGSLDPYVEVKLGNYKGLTKHLDKNQNPVWKQIFAFSKERLQSNLLEVTVKDKDIGKDDFVGRVMFDLTEVPLRVPPDSPLAPQWYRLEDKKGQKIHNNGEIMLAVWMGTQADESFPEAWHSDAHNVSHSNLANTRSKVYFSPKLFYLRVQVIEAQDLVPSDKGRAPDAVVRVKLGNQMRFTRPSQMRSTNPVWNDELMFVAAEPFEDFIIVTVEDKVGPSAEILGREIISVRSVPPRHETSKLPDSRWFNLHRPSAVGEEETEKKKEKFSSKIHLRMCLEAGYHVLDESTHFSSDLQPSSKHLRKKNIGILELGILSARNLVPLKAREGRTTDAYCVAKYGNKWVRTRTLLDTLSPRWNEQYTWEVYDPCTVITIGVFDNHHINGSSDAKDQRIGKVRIRLSTLETDRVYTHFYPLLVLQPNGLKKNGELHLAVRFTCTAWVNMVAQYGRPLLPKMHYVQPIPVKHIDWLRHQAMQIVAARLSRAEPPLRRETVEYMLDVDYHMWSLRRSKANFHRIMSILKGVTAVCKWFDDICTWRNPITTCLVHVLFLILVCYPELILPTIFLYLFVIGIWNYRFRPRQPPHMDARLSQAETAHPDELDEEFDTFPSTKPSDIVRMRYDRLRSVAGRVQTVVGDLATQGERAQAILNWRDSRATSIFIIFSLIWAVFIYITPFQVVAILVGLYMLRHPRFRSKMPSVPVNFFKRLPSRSDTLI* | 1021 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lapu11g01147 | 1020 | SMART | C2_3c | 450 | 547 | IPR000008 | - | |
| Lapu11g01147 | 1020 | SMART | C2_3c | 614 | 717 | IPR000008 | - | |
| Lapu11g01147 | 1020 | SMART | C2_3c | 287 | 383 | IPR000008 | - | |
| Lapu11g01147 | 1020 | SMART | C2_3c | 3 | 108 | IPR000008 | - | |
| Lapu11g01147 | 1020 | MobiDBLite | consensus disorder prediction | 128 | 203 | - | - | |
| Lapu11g01147 | 1020 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 613 | 746 | IPR035892 | - | |
| Lapu11g01147 | 1020 | CDD | C2B_MCTP_PRT_plant | 287 | 413 | IPR047257 | - | |
| Lapu11g01147 | 1020 | PANTHER | PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 | 3 | 1019 | IPR047259 | - | |
| Lapu11g01147 | 1020 | ProSiteProfiles | C2 domain profile. | 596 | 718 | IPR000008 | - | |
| Lapu11g01147 | 1020 | FunFam | C2 domain-containing protein | 282 | 428 | - | - | |
| Lapu11g01147 | 1020 | MobiDBLite | consensus disorder prediction | 184 | 203 | - | - | |
| Lapu11g01147 | 1020 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 287 | 427 | IPR035892 | - | |
| Lapu11g01147 | 1020 | ProSiteProfiles | C2 domain profile. | 269 | 389 | IPR000008 | - | |
| Lapu11g01147 | 1020 | Gene3D | C2 domain | 432 | 583 | IPR035892 | - | |
| Lapu11g01147 | 1020 | Gene3D | C2 domain | 273 | 410 | IPR035892 | - | |
| Lapu11g01147 | 1020 | CDD | C2C_MCTP_PRT_plant | 450 | 602 | IPR047258 | - | |
| Lapu11g01147 | 1020 | Gene3D | C2 domain | 589 | 742 | IPR035892 | - | |
| Lapu11g01147 | 1020 | Pfam | Plant phosphoribosyltransferase C-terminal | 865 | 1019 | IPR013583 | - | |
| Lapu11g01147 | 1020 | CDD | C2D_MCTP_PRT_plant | 614 | 737 | IPR047255 | - | |
| Lapu11g01147 | 1020 | ProSiteProfiles | C2 domain profile. | 429 | 548 | IPR000008 | - | |
| Lapu11g01147 | 1020 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 450 | 604 | IPR035892 | - | |
| Lapu11g01147 | 1020 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 3 | 140 | IPR035892 | - | |
| Lapu11g01147 | 1020 | ProSiteProfiles | C2 domain profile. | 1 | 110 | IPR000008 | - | |
| Lapu11g01147 | 1020 | FunFam | C2 domain-containing protein | 596 | 744 | - | - | |
| Lapu11g01147 | 1020 | Pfam | C2 domain | 3 | 102 | IPR000008 | - | |
| Lapu11g01147 | 1020 | Pfam | C2 domain | 613 | 720 | IPR000008 | - | |
| Lapu11g01147 | 1020 | Pfam | C2 domain | 450 | 555 | IPR000008 | - | |
| Lapu11g01147 | 1020 | Pfam | C2 domain | 287 | 389 | IPR000008 | - | |
| Lapu11g01147 | 1020 | CDD | C2A_MCTP_PRT_plant | 3 | 128 | - | - | |
| Lapu11g01147 | 1020 | Gene3D | C2 domain | 1 | 157 | IPR035892 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lapu11g01147 | Lapu-Chr11 | 13455316 | 13458381 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lapu11g01147 | 1 | 1020 | Lipid Metabolism Gene Families | AT1G22610 | 71.579 | 0.0 | 1495 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lapu11g01147 | - | - | gmx:100778133 | 1784.62 |