Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01142 ATGGCCGAAAATCATTCAAACCCTCCTCCGCTCGCTTCACAGCCTCAGGACCCTCCTGTGCCTCCCTCACTGTCATCGGAGAATCATGCCAAAGCTCACGATTTAGTCGAAGAGAAGGTAACGGCTGAGGAGGTGCTTGTGGTTGAGGAGAAGGTAAAGGCTGAGGAGGTGCTTGTGGTTGAAGAGGAAGAGAAAGAGCAAGAGCAAGAGCAAGAGAAAGACGAGGTAAAAGGTGGCGAGGAGGCTGTTGTTGTGGTTGAAGAGAAGGAGAAAGAGAAAGAGACAGAGAAAGAAGAAGAGGTTACCGCCGGAGAGACAGAGAGCGAGTCGTTGAAGGAGGAGAGCAATAGGGTTTCTGAGTCGGAGAGAAAGGGCATCCAAGAGCTGAAGAAGGCGCTGGGGGAAGAGTTGGAGCAGAAGGGGGAGGGCGAGGTATCCATCTGGGGCGTCCCTCTCATGAAGGACCACAGGACTGACGTCATTCTTCTGAAGTTCCTGAGAGCGCGGGACTTGAAGGTGAAGGATGCTCTTGTGATGATTCAGAACACTCTCCGATGGAGGAAGGAGTTCGGCATCGATGCGCTTTTGGAGGAAGATCTGGGAGAGGAGTTGGAGAAGGTGGTGTTCATGCACGGACACGGAAGAGAGGGGCATCCCGTGTGTTACAACGTCTACGGAGAGTTCCAGAACAAGGAGCTGTACCATAAGGCCTTCTCCTCCGAGGAAAACCGAACCAAGTTTCTCCGATGGCGGATTCAGCTGTTGGAGCGCAGCATCAGGAACCTGGACTTCACTCCCGGAGGCATCAACACCATTTTCCAAGTCAATGACCTCAAAAACTCTCCTGGCCCTGCCAAACGGGAACTTCGCCTCGCCACCAAACAAGCTTTGCAGTTGCTTCAGGACAACTATCCCGAGTTTGTTGCCAAACAGGTTTTTATCAATGTCCCTTGGTGGTATCTTGCATTCTACACCATGATCAATCCCTTCTTGACTCAGAGGACCAAAAGCAAATTTATCTTTGCCGGACCATCCAAGTCTCCCGATACTCTTTTCAAGTATATTTCTCCTGAGCAAGTGCCGGTTCAGTATGGTGGCCTCAGTGTAGATTTCTGTGACTGCAACCCCGATTTCACTATGTCTGATCCCGTCACCGAAATTCCTATAAAGCCAACCACTAAGCAAACTGTCGAAATTGCTATCTATGAGAAATGCATTATTGTTTGGGAGCTGCGGGTGGTGGGCTGGGAGGTTACCTATAATGCCGAATTCAAGCCTGATGCTAAAGATGCATATACAGTTGTCATACAGAAGGCCACAAAGATGTCCCCCGCGGATGAACCAGTGGTTTCCAATAGCTTCAAAGTTAGTGAACTGGGGAAATTATTGCTCACCATAGACAATCCTACCTTGAAAAAGAAGAGGCTTCTTTACAGGTTCATGATAAAACCCTACTGTGATTGA 1464 0.4945 MAENHSNPPPLASQPQDPPVPPSLSSENHAKAHDLVEEKVTAEEVLVVEEKVKAEEVLVVEEEEKEQEQEQEKDEVKGGEEAVVVVEEKEKEKETEKEEEVTAGETESESLKEESNRVSESERKGIQELKKALGEELEQKGEGEVSIWGVPLMKDHRTDVILLKFLRARDLKVKDALVMIQNTLRWRKEFGIDALLEEDLGEELEKVVFMHGHGREGHPVCYNVYGEFQNKELYHKAFSSEENRTKFLRWRIQLLERSIRNLDFTPGGINTIFQVNDLKNSPGPAKRELRLATKQALQLLQDNYPEFVAKQVFINVPWWYLAFYTMINPFLTQRTKSKFIFAGPSKSPDTLFKYISPEQVPVQYGGLSVDFCDCNPDFTMSDPVTEIPIKPTTKQTVEIAIYEKCIIVWELRVVGWEVTYNAEFKPDAKDAYTVVIQKATKMSPADEPVVSNSFKVSELGKLLLTIDNPTLKKKRLLYRFMIKPYCD* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01142 487 PANTHER PATELLIN-1 69 484 IPR044834 GO:0008289
Lapu11g01142 487 MobiDBLite consensus disorder prediction 1 37 - -
Lapu11g01142 487 SMART CRAL_TRIO_N_2 158 183 IPR011074 -
Lapu11g01142 487 SMART sec14_4 202 369 IPR001251 -
Lapu11g01142 487 Coils Coil 51 82 - -
Lapu11g01142 487 MobiDBLite consensus disorder prediction 70 124 - -
Lapu11g01142 487 Pfam CRAL/TRIO, N-terminal domain 127 182 IPR011074 -
Lapu11g01142 487 CDD SEC14 206 367 IPR001251 -
Lapu11g01142 487 FunFam SEC14 cytosolic factor family protein 202 382 - -
Lapu11g01142 487 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 197 366 IPR001251 -
Lapu11g01142 487 SUPERFAMILY CRAL/TRIO N-terminal domain 104 199 IPR036273 -
Lapu11g01142 487 MobiDBLite consensus disorder prediction 57 124 - -
Lapu11g01142 487 Pfam CRAL/TRIO domain 206 366 IPR001251 -
Lapu11g01142 487 Gene3D - 111 402 IPR036865 -
Lapu11g01142 487 SUPERFAMILY CRAL/TRIO domain 207 376 IPR036865 -
Lapu11g01142 487 ProSiteProfiles GOLD domain profile. 377 482 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01142 Lapu-Chr11 13432125 13435404 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01142 162 361 Acyl Lipid Metabolism Gene Families AT1G55840 30.476 6.94e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01142 - - gmx:100804006 676.396