LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu11g01124	ATGGATACAAATGTTGATGCGGAGATTGTGATCGTGGGAGCTGGCATATGCGGCCTTGCAACAGCCCTTGCCCTTCACAGGAAGAGAATTAAAAGTGTGGTGTTAGAAAAATCAGAGACTGTACGAGCAACAGGAGCAGCCATAATCGTGCAGGCAAATGGCTGGCGTGCACTTGATCAGCTTGGCATTGGTTCAACACTTAGAGAAACTGCTATTCAAATACAAAGGGGAAGATTCATATCTCTTAACGAGGCTGAGCCAATGGAATTTCCATTTGGGGTTAATCAAGAATTTCGTTGTTTAAAACGTACTGATCTGGTGAAAGCCATGGCCGATAATTTACCGACAGGGACTATACGTACCAGTTGTGAAGTGCTTTCGATTGATTTAGATCCTGTAACAAAGTTTCCACACCTTATGCTTAGCAATGGTAGTGTCGTTCAAGCTAAGGTTGTTATTGGATGTGATGGTGTGAATTCTGCCATTGGAAGCATGTTTGGGTTACACCAAACTTCCCTGTCGCTCTTCTCTACATGTGTTATACGAGGCTTCACAGATTATCCAAGTGGTCATCACTTTGCTAGTGAGTTTGTTGTGATGAGCAAAGGTCAAGTTCAACTCGGAAGACTTCCTGTGTCTGACAAACTCGTTTATTGGTTTGTGACAAGACTAAGGACTTCTCAAGATTCAACAATTTGGAGAGACCCACTTCTTATAAGACAATCATTGATGGAATCAATGAAAGGTTTCCCAGAAGGGGCCATGGACATGATAACAAATTGCATGTTGAGCTTCTTGCATCTCACTGAGTTGAAGTATCGGGCACCGTGGGACTTGCTCTTTAACAACTTCAGGAAAGGAACGGTAACAATTGCCGGTGATGCAATGCATGCCACAGGCCCATTTGTTGCACAGGGTGGCTCGGCTTCCATAGAAGATGCCATTGTTCTTGCTAGATGCCTCGCACAAAAGATGCTCAATAATACCAAGAAGGCTGGAGAAATGGAAATAAATGTCACACTGGCAGAAAAAGCAATTAATCAATATGTGAAAGAAAGGAAGATGAGAAACTTTTGGCTCTCTCTTCATTCCTTCCTTGTTGGGAAGAAGCTTGACACAAAATCATCCATGGTTAGATTCATTATCCTTGCAATCATGTTTGTTCTGTTTAGAGACCCCGATTGGCATTCGCGCTATCATTGTGGAAGTCTATAG	1215	0.428	MDTNVDAEIVIVGAGICGLATALALHRKRIKSVVLEKSETVRATGAAIIVQANGWRALDQLGIGSTLRETAIQIQRGRFISLNEAEPMEFPFGVNQEFRCLKRTDLVKAMADNLPTGTIRTSCEVLSIDLDPVTKFPHLMLSNGSVVQAKVVIGCDGVNSAIGSMFGLHQTSLSLFSTCVIRGFTDYPSGHHFASEFVVMSKGQVQLGRLPVSDKLVYWFVTRLRTSQDSTIWRDPLLIRQSLMESMKGFPEGAMDMITNCMLSFLHLTELKYRAPWDLLFNNFRKGTVTIAGDAMHATGPFVAQGGSASIEDAIVLARCLAQKMLNNTKKAGEMEINVTLAEKAINQYVKERKMRNFWLSLHSFLVGKKLDTKSSMVRFIILAIMFVLFRDPDWHSRYHCGSL*	405

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu11g01124	404	Gene3D	-	8	376	IPR036188	-
	Lapu11g01124	404	PANTHER	FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN	7	404	IPR044560	-
	Lapu11g01124	404	Pfam	FAD binding domain	7	324	IPR002938	GO:0071949
	Lapu11g01124	404	SUPERFAMILY	FAD/NAD(P)-binding domain	8	393	IPR036188	-
	Lapu11g01124	404	PRINTS	Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature	301	317	-	-
	Lapu11g01124	404	PRINTS	Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature	148	163	-	-
	Lapu11g01124	404	PRINTS	Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature	8	30	-	-
	Lapu11g01124	404	PRINTS	Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature	286	301	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu11g01124	Lapu-Chr11	13301968	13304879	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu11g01124	1	368	Miscellaneous Gene Families	AT5G05320	35.389	7.61e-72	229

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu11g01124	-		-	gmx:100775200	669.463