Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01111 ATGGTAGGTGGATACTATGATGCTGGCGACAATGTGAAATTCAATTTTCCAATGGCATTCACAACGACTATGCTAGCTTGGAGTGTGGTGGAATTTGGAGATTTGATGGGTTCAGAGCTGAATAATGCATTGGATGCAATCAGGTGGGGAACTGATTATTTCCTTAAAGCCACAAAATTTCCTGATATGGTTGTGGCACAAGTGGGCAATCCTATTGCTGATCACGATTGTTGGGAGAGACCAGAAGACATGGACACTCCTCGTACATCGTACTATGTCACTAAACAGAAGCCAGGTTCAGAACTCTCTGCTGAGATTGCAGCTGCACTTGCAGCATCTTCCATCGCATTAAGAACAACCTATACTTCCTATTCCAAAATTCTTCTTAACAGAGCTATCCAGGTGTTTGACTTTGCAAATAAATATCGTGGATCTTATAGTACTAGCGTAGGTGATGGAGCATGCCCCTTCTACTGTGATTTTAACGGCTACATGGATGAGTTGATTTGGGGAGCAGCATGGTTGTATAAAGCCACAAATACAGCCAGTTATTGGGATTTTGTAAAATCAAACATTCAAACATTGGGCGGCAGTATCTTTGAATTTGGATGGGATGCCAAACACGCTGGCATAAACGTGCTTGTTTCTCAGTGGGCGATGGGTGATCCAAGCAGTGCAGACCTTTTCATTCCTAATGCAGATAAATTTATGTGTTCTTTGTTGCCAAATTCACCAACCAAATCAGTGTCCAACTCCAAAGGTGGTCTTCTATTGAAACCTGGAGGAAGTAATCTACAACACACAACAGCTTTGTCATTTCTTTTAATTGTTTATGCACGTTACATGCATGGTGTGAAGAAAAGAATACCCTGTGGGCAAGAAGTTGTGGATCCAAATTGGCTCATAAAGATTGCAAGAAGTCAGGCAGAATACATACTGGGGAAGAATCCACTGGGAATGTCGTACATGGTGGGGTATGGAGCCAAGTTTCCTGAGAAGATACACCATCGTGGTTCAGTCTTACCATGTTTGGATAGGCACCCTCAACACCTTGGGTGTCGTGATGGAGATGAATACTTCAAATCAGATAAACCCAATCTCAACCTCCTAACAGGAGCTGTTGTTGGAGGACCTGCAGATGATGATTCCTTTCAGGATTCCCGTTATAATGTTTCCCAATCAGAACCAACCACCTACATCAATGCTCCTTTTGTTGGTGTTTTGGATTACTTCAACAAACCCACTCTTACA 1251 0.4253 MVGGYYDAGDNVKFNFPMAFTTTMLAWSVVEFGDLMGSELNNALDAIRWGTDYFLKATKFPDMVVAQVGNPIADHDCWERPEDMDTPRTSYYVTKQKPGSELSAEIAAALAASSIALRTTYTSYSKILLNRAIQVFDFANKYRGSYSTSVGDGACPFYCDFNGYMDELIWGAAWLYKATNTASYWDFVKSNIQTLGGSIFEFGWDAKHAGINVLVSQWAMGDPSSADLFIPNADKFMCSLLPNSPTKSVSNSKGGLLLKPGGSNLQHTTALSFLLIVYARYMHGVKKRIPCGQEVVDPNWLIKIARSQAEYILGKNPLGMSYMVGYGAKFPEKIHHRGSVLPCLDRHPQHLGCRDGDEYFKSDKPNLNLLTGAVVGGPADDDSFQDSRYNVSQSEPTTYINAPFVGVLDYFNKPTLT 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01111 417 PANTHER ENDO-1,4-BETA-GLUCANASE 2 412 - -
Lapu11g01111 417 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 311 337 IPR018221 -
Lapu11g01111 417 FunFam Endoglucanase 1 415 - -
Lapu11g01111 417 Pfam Glycosyl hydrolase family 9 2 408 IPR001701 GO:0004553|GO:0005975
Lapu11g01111 417 Gene3D - 1 415 IPR012341 GO:0005975
Lapu11g01111 417 SUPERFAMILY Six-hairpin glycosidases 2 412 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01111 Lapu-Chr11 13225314 13227025 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01111 1 412 Glycoside Hydrolase AT1G70710 57.831 3.57e-177 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01111 K01179 - gmx:100814370 684.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g01111 11 13225314 13227025 Lapu11g01111 11 13225314 13227025 ECH