Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01104 ATGGAGAGTGCTTTTGCAAGCGCTTCTGCGATTACAGACCAGAGGCAAAAAATAGAGCAGTATAAGAGCATACTCGCTGCTGTCATTTCGTCTAATGACATTGCTCAGTCTAGGAAATTCATAGATCACATGTTATCGGATGATGTTCCATTAGTAGTGTCGCGGCAGCTTTTGCAGACTTTTGCTCAAGAGTTGGGAAGATTGGAGCCTGAGATACAGAAAGAGATTGCTCATTACACCCTTGCTCAAATTCAGCCTCGTGTTGTGTCGTTCGAAGAGCAGGTTTTAGTTATTAGAGAGAAACTCGCTGAGCTTTATGAATCTGAGAAGCAATGGTCAAAAGCAGCACAAATGCTCAGTGGTATTGACCTAGATTCAGGAATGAGGGTGATTGATGATGCATTCAGGTTGTCAAAGTGTGTCCAAATTGCTTGTTTATATCTTGAGGATGATGATGCGGTCAATGCCGAGGCTTTTATTAATAAAGCATCATTCTTGGTCAGCAGTAGTCAGCATGAAGTACTCAATTTAAAGTACAAGGTTTGCTATGCAAGGATCTTAGATTTGAAGAGGAAGTTTTTGGAAGCAGCATTACGGTATTATGACATATCTCAAATTGAGAAAAGGAAAATAGGAGACGAGGAGATTAATGAGGAAGCACTTGAACAAGCTTTATCTGCTGCTGTTACATGCACGATATTGGCTGCTGCAGGACCTCAACGTTCCCGTGTTCTTGCCACCCTGTACAAGGATGAGCGGTGTTCAAAGTTGAAGATCTATCCAATATTGCAGAAGGTGTATTTGGAGAGAATTCTAAGAAAACCAGAAATTGATGCTTTTTCAGAAGAATTGAAACCACATCAGAAAGCTCTTCTTCCAGACAATTTCACTGTGCTAGACCGGGCTATGATTGAGCATAATCTTCTTAGTGCAAGCAAACTTTATACTAATATCAGCTTTGGTGAGCTAGGCACGCTATTGGGGATCCCACCTCACAAGGCTGAGAAGATAGCATCCAGAATGATTTATGAGGATAGGATGAGGGGATCTATCGATCAGGTTGAAGCAGTCATACATTTTGATGACGACACTGAAGAGTTGCAGAGATGGGACCAGCAGATTGTAGGCCTATGTCAAGCTCTCAACGATGTTTTGGATAGCATGGCCAAGAAGGGTTTTCCAGTTCCTGTTTAA 1194 0.4188 MESAFASASAITDQRQKIEQYKSILAAVISSNDIAQSRKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPEIQKEIAHYTLAQIQPRVVSFEEQVLVIREKLAELYESEKQWSKAAQMLSGIDLDSGMRVIDDAFRLSKCVQIACLYLEDDDAVNAEAFINKASFLVSSSQHEVLNLKYKVCYARILDLKRKFLEAALRYYDISQIEKRKIGDEEINEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFSEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFGELGTLLGIPPHKAEKIASRMIYEDRMRGSIDQVEAVIHFDDDTEELQRWDQQIVGLCQALNDVLDSMAKKGFPVPV* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01104 397 ProSiteProfiles PCI domain profile. 192 365 IPR000717 -
Lapu11g01104 397 Gene3D - 291 369 IPR036388 -
Lapu11g01104 397 FunFam COP9 signalosome complex subunit 4 289 369 - -
Lapu11g01104 397 Pfam PCI domain 268 361 IPR000717 -
Lapu11g01104 397 SUPERFAMILY "Winged helix" DNA-binding domain 292 366 IPR036390 -
Lapu11g01104 397 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 294 377 IPR000717 -
Lapu11g01104 397 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4 4 391 IPR040134 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01104 K12178 - gmx:100793394 753.821