Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01097 ATGGCTCTCCTCACTTTCCCTCACTTTTCTTCCCATTTTCCGTCACTTTCTTCCTTCCGAAACGCTCGCTCTTTCTCTCCAACTCGACGCTACTGTTTGATGAAGGCAACTGGAACGGCCATTCTGTGGTTCAAGCACGATCTCCGAACCGATGACCACCCGGCGCTTCTCGCCGCCTCCACCTTTCCCTCACTCCTTCCTATATACGTCTTCGATAACCGCATTCTTTCCCGTTTCTCCGATGAGACGCTGGAACTGCTTCTGCTTGCTCTGCAAGATTTGAGGAAGTCGCTGAAGGATCGCGGTTCCGATTTGATGATCAGATTCGGCAATGCGGACAGCGTCATACAGCAACTTGCAACGGAGGTCAAAGCCACTTGTGTGTTCGCGGAACAAGAGGTGGAGTATGAGCTACGCCTCATGATAGATGTGCTCAAACAGCGTTTGAAGTCCGTCACAGTTCCGCAAGGGAGTCCTAGGATTGAATTATGGCAAACTCCATTTTATGATGTAAAGGATGTGCAAAATCTTCCTGCGTCGTATGATGAGTTTAAGAAACGTCGACTTCCTGTGACTTCACCACTTCAGCTGTCAGTATCAACGTTACCTGGTGTAGAAATAGAACTGGACTGGGGTGTTCTCCCCTCGTTTGATGATATAAAGGGATTTATGACTAGCAACCAACGTAAATCAGGAGAGAATTGGAGTTTAATTAAGGAGGCCTCTGCTGAAACCGTTTTACGCAGAAAAGCATCCGGGTCTGGCGATAGCATTGAAAGAAGTTCTGGCTTTAGGCAAACACAGTCAAGGGAGCGTAGTGGATCTGTTTTTGTGACAAAAGAAGGAAATGTCGTAGGAGGTGGTACAAACAATGTACTGAATGCACTAGCTGCATATCTAAGATATTTGGAAGGAACGGCTCGTGATGACTGGCAAGAGGTACATGAAAAAGTGCGTGCTTCTGAAAGTCGGAATGGAGCATCATTTATTGGGCTATTCGGTCCTGTCCTATCTCTTGGCATTATATCTAGAAGAAGAGTATATTATGAAGCTATCAAATATGAGCAAGAACGAAATGCAGGTTTCTTATCACCCTTTGGTTATTCATCTGCCACAATTGCAGCAGCAGTTGATGCTGTGTGCTCAATGGAGTGGTATTGGCTTATGGCTTTGAGAAATCAGATAAACAATGACGGAGTATACTCAACAAGGATATGGAAATGGAAAGGATTTCTTATCGAGTATACGGTTGCTGGTGATGACGGTCCTGCCGTTCTTCTTGTGCATGGTTTTGGTGCCTTTTGGGAGCATTACCGGGACAACATACATGGTTTAGCTGAATCTGGAAATCGAGTTTGGGCAATTACTATTTTGGGATTTGGCAAATCAGAAAAGCCAAATGTTGTATATACTGAACTCTTGTGGGCTGAACTATTGAGAGATTTTATTGTTGATGTTGTGGGTGAACCAGTTCATATTGTTGGCAACTCAATTGGCGGTTATCTTGTTGCTGTTGTTGCTGGTATTTGGAGTGATTTGATCAAATCCCTTGTTTTGATCAACAGTGCGGGCAATGTCATCCCAAGTTATTCATTCATACCATTATCTAGAGTTCAAGATAGGCAAACTTCAGGGGCTTCCTGGCTGGGTTCTCGCATTCTTCTATTCTACTTGAGGCTGAGAACTCAAGATTTAGTTAAGAAATGTTATCCAACTAGAGTTGAAAGAGCAGATGACCGGCTCATAAATGAAATGCTTAGAGCATCATATGATCCTGGTGCGCTTGTGGTGTTGGAAAGCATCTTTAGCTTTAATCTTTCCATACCGGTAAACTTTCTTCTTGAAGATGTCAAGGAAAAGGTCCTAATTATACAGGGGATGAAAGATCCGATTTCTGACTCCAACTCCAAGGTGGCTATGCTTAAAGAACACTGTGATGGAGTTATAATTAAGGAGTTAGATGCTGGTCATTGTCCGCACGACGAGGTGCCAGAACGAGTGAATACTATTATTTCTGACTGGATAGTTGGTGTCGAAAGTAACATTTTGGTAGAATGTCCGGTGTAA 2067 0.4378 MALLTFPHFSSHFPSLSSFRNARSFSPTRRYCLMKATGTAILWFKHDLRTDDHPALLAASTFPSLLPIYVFDNRILSRFSDETLELLLLALQDLRKSLKDRGSDLMIRFGNADSVIQQLATEVKATCVFAEQEVEYELRLMIDVLKQRLKSVTVPQGSPRIELWQTPFYDVKDVQNLPASYDEFKKRRLPVTSPLQLSVSTLPGVEIELDWGVLPSFDDIKGFMTSNQRKSGENWSLIKEASAETVLRRKASGSGDSIERSSGFRQTQSRERSGSVFVTKEGNVVGGGTNNVLNALAAYLRYLEGTARDDWQEVHEKVRASESRNGASFIGLFGPVLSLGIISRRRVYYEAIKYEQERNAGFLSPFGYSSATIAAAVDAVCSMEWYWLMALRNQINNDGVYSTRIWKWKGFLIEYTVAGDDGPAVLLVHGFGAFWEHYRDNIHGLAESGNRVWAITILGFGKSEKPNVVYTELLWAELLRDFIVDVVGEPVHIVGNSIGGYLVAVVAGIWSDLIKSLVLINSAGNVIPSYSFIPLSRVQDRQTSGASWLGSRILLFYLRLRTQDLVKKCYPTRVERADDRLINEMLRASYDPGALVVLESIFSFNLSIPVNFLLEDVKEKVLIIQGMKDPISDSNSKVAMLKEHCDGVIIKELDAGHCPHDEVPERVNTIISDWIVGVESNILVECPV* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01097 688 MobiDBLite consensus disorder prediction 248 274 - -
Lapu11g01097 688 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 38 200 IPR036155 -
Lapu11g01097 688 Pfam Alpha/beta hydrolase family 425 668 IPR000073 -
Lapu11g01097 688 Pfam DNA photolyase 41 188 IPR006050 -
Lapu11g01097 688 Gene3D HUPs 24 187 IPR014729 -
Lapu11g01097 688 Gene3D alpha/beta hydrolase 394 676 IPR029058 -
Lapu11g01097 688 PANTHER DNA PHOTOLYASE 30 682 - -
Lapu11g01097 688 SUPERFAMILY alpha/beta-Hydrolases 401 675 IPR029058 -
Lapu11g01097 688 MobiDBLite consensus disorder prediction 256 274 - -
Lapu11g01097 688 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 38 171 IPR006050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01097 Lapu-Chr11 13118883 13124000 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01097 421 534 Acyl Lipid Metabolism Gene Families AT2G26740 30.833 1.30e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01097 - - gmx:100813721 1179.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g01097 11 13118883 13124000 Lapu11g01097 11 13118883 13124000 ECH