Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01096 ATGTCAAAGGATAAAGACGCTACCAGTCTCTCACGCACCTTTAAATACCTATTGGCTACCCAATTCTTGTCAAGAGGGATTCCATTTATATTCAATACATGGATTGTAAGGCATCTCACACAAGAGGACTACGCGCTGTATGCAGTGCAGTTTCATCTGTTAGTCACATGTATCTTATTTCTCAGCAGGGAGGGCTTTCGGCGAGCATGCTTGCGAATGGACCTGACATGTGATGGCACTTCAATGGGAGATGTTGTGAAGCTGATGAAAGTAGTGTGGATGAGTTTCCCACTTGGAATATTTATTACAATTGTAGTATGCCTTTTTGTCTTCTGGTGGCAACAAATAAGTTATTGTAGTCCTCATGGGCAAGCTATCTTGATCAATGGTTTTGCGTGTATTTTGGAGCTCTTGGCTGAGCCTGTGTACATTCTTTCACAAAGCATGGTCTTACTTGAATTACGGCTGATGGTTGAGACTATAGCCACTCTGTTACGGTGCTTGACAATGTATTTTCTAATCATCAAACAAACTGGAATTGAAAAATCAATCATATTTGCGTTGTCACAGTCTGCATACGGAGCCTGCTTATTTCTTGGTTATTGGGGCTATCTTTTGCTTTCCCAAAAATTTAGGTTTTCTTACCTCTTTCCATTCAGAAAAGGAGAAGCGTCTGGTTTTGACCAGCAGCTGTCCAAGATGTGTATACTGTTTACCTTTCAATCCTTTCGAAAATTGATCCTTCAGGAAGGAGAAAAGATAGTACTTGTATGGTTGGATACACCATATAATCAGGCAGTATACGGCCTTGTGGACAAATTGGGTAGCTTAGTGGTGAGACTTGTCTTTTTACCTTTCGAAGAAAGTTCATATGCAACATTTGCAAGGTCTGCTTCAGGAGAATATCCAGGAAAAAGCAAGAAATTGGGAAATGGCTTGACGGAATCCCTTAAGTTAGTTTTGTTGATTGGCCTTGTTTTTATGGCATTTGGTCCAAGTTATTCTTATTCACTCATTAGATTGCTTTATGGTGAAAAATGGAGTGATGGAGAAGCGTCAACTGCCCTCCGCTGTTATTGCTTTTATGTCATTGTCTTGGCCATGAATGGAACCTCTGAAGCCTTTATGCATGCAGTTGCAACCGAGAGCCAACTCAAGCGTTCAAATGATTCTCTACTTACATTCTCGTTGATCTATATAATTTTGAATGTCCTGCTAATAAGGTTAGCTGGGGCAGTTGGCTTGATAATGGCAAATTCTCTCAATATGACCTTGAGGATTTTATACTCTGCTATATTCATAAAGAATTACTTCCAGGGATCTTCCTCATTTTCTTTCTATAGATGCTTGCCGTCAGGATGGAGTGTTCTGTTACTTTCAGGCATAATCACTCTCATTTCTGAGAATGTATTTTTGGACCGTGATCATTTCTGGCCATCGTTCATGGTCCATTTCTCTGTTGGGCTGGGTTGCTTCTGTGTGTCATCATACGTGATCTATTGCCGGGAAAAAACTTTCATCAGAAGACTTATTCGCTTTAATGATCATGTGGACTGA 1557 0.4033 MSKDKDATSLSRTFKYLLATQFLSRGIPFIFNTWIVRHLTQEDYALYAVQFHLLVTCILFLSREGFRRACLRMDLTCDGTSMGDVVKLMKVVWMSFPLGIFITIVVCLFVFWWQQISYCSPHGQAILINGFACILELLAEPVYILSQSMVLLELRLMVETIATLLRCLTMYFLIIKQTGIEKSIIFALSQSAYGACLFLGYWGYLLLSQKFRFSYLFPFRKGEASGFDQQLSKMCILFTFQSFRKLILQEGEKIVLVWLDTPYNQAVYGLVDKLGSLVVRLVFLPFEESSYATFARSASGEYPGKSKKLGNGLTESLKLVLLIGLVFMAFGPSYSYSLIRLLYGEKWSDGEASTALRCYCFYVIVLAMNGTSEAFMHAVATESQLKRSNDSLLTFSLIYIILNVLLIRLAGAVGLIMANSLNMTLRILYSAIFIKNYFQGSSSFSFYRCLPSGWSVLLLSGIITLISENVFLDRDHFWPSFMVHFSVGLGCFCVSSYVIYCREKTFIRRLIRFNDHVD* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01096 518 Pfam Rft protein 12 511 IPR007594 GO:0006488|GO:0016020
Lapu11g01096 518 CDD MATE_rft1 9 440 - -
Lapu11g01096 518 PANTHER ENDOPLASMIC RETICULUM MULTISPAN TRANSMEMBRANE PROTEIN-RELATED 1 514 IPR007594 GO:0006488|GO:0016020
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01096 K06316 - gmx:100817452 956.822
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g01096 11 13107888 13117275 Lapu11g01096 11 13107888 13117275 ECH