Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01093 ATGTCGTTCCGATCGGAGAACGAGAACCCAAACCCTACTCCCACTCCCACTCCGCCGTTGAAGAAGCGATGGTCAGACATATGGACGAAATCGAAGCCCATAAGCCAAATGGTGATGTCAATGAAGCTTCACTCTCTCTCTCCTCGCCTCCCCGACAAAGCCAAACCCACCCTCTCTCCTTTCCCCGCCGTCTCCGTCGCCCTCGCCGACCCAACCCTTCTCTTCTCCGACGAGATTCTCCTCAAAATCCTCGCACTCCTCTCCGACTCCCCCGCTCAGCGAAACTCCAATTCTCTCGTCTGCAAGCGCTGGCTCAATCTCCAAGGCCGTCTCCTCCGCTCCCTCAAAATCTCCGACTGGAACTTCCTCCTCTCCGGCAGACTCATCCACCGCTTCCCCAATCTCAACCACGTCGATCTGCTCTCCGCCGCCTTCATTTCCCCTCGCAATTCCTCCATTCTCTTTAGCCACCGCCTCCTCTCCATGCACCTCCATTCCGACCTTTCCCCCAACTGGTGCTTCTGTGAGGAAAACCTGCTCCCCGTCGAAGTCATCGACAATGGACTCGCCACCCTCGCCGCCGGCTGCCCTAACTTGCGCCGCCTCCACCTCATCGGCGCCAGCGAGATGGGGCTGCTGAGCGTCGCGGAGGAGTGTCCCACTCTGCAGGAACTCGAACTGCAGTGCTGCAGCGACAACGTTTTGCGCGGGATCGCAGCGTGTGCGAATCTTCAGATTCTGAAGCTCGTTGGGCGTGTTGATGGGTTCTACAATTCGGTGGTTTCTGATATTGGGTTGACAATTCTGGCTCAGGGGTGTAAGAGGCTGGTGAGGTTGGAGCTTTGTGGGTGCGAAGGGAGTTTTGATGGGATTAAGGCCATTGGGAAGTGTTGTTTAATGTTGGAGGAGTTGACGTTTTCTGATCATAGGATGGATGATGGATGGCTTGCTGCCATCTCGTTCTGTGAGAATTTGAAGACTCTGAGGTTGCAGTCTTGTAAGAGGATTGATCCCAATCCTGGAATGGAGGAGTATTTGGGTTCTTGCCCTGCTCTTGAACGGTTGCATCTGCAAAAATGTCAGTTGCGGGATAAGAAGAGCGTTTCGGCTTTGTTTTCGGTGTGCAGGGCCGTAAGGGAGATTGTTCTTCAGGACTGTTGGGGATTGGATAATAGCATCTTCTGCTTCGCAATGATGTGCAGGCGCGTAAAGCTGTTTTACTTGGAAGGATGCTCATTACTAACGACAGAAGGTTTTGAGTCTGTAATTCATTCGTGGAAGGAGCTTCAGAGCCTGAGAGTAGTATCATGTAAGAATATAAAGGATTATGAGATCTCCACTGCGCTCGCAACCTTGTTTACCACTCTCAAAGAGTTGAGATGGAGCCCTGATACCAAATCACTTCTTCCATCCAGTGTCACGGGGATAACTATGGGAAAAAAAGGTGGTAAATTTTTCAAAAGGGCACGATAA 1473 0.5214 MSFRSENENPNPTPTPTPPLKKRWSDIWTKSKPISQMVMSMKLHSLSPRLPDKAKPTLSPFPAVSVALADPTLLFSDEILLKILALLSDSPAQRNSNSLVCKRWLNLQGRLLRSLKISDWNFLLSGRLIHRFPNLNHVDLLSAAFISPRNSSILFSHRLLSMHLHSDLSPNWCFCEENLLPVEVIDNGLATLAAGCPNLRRLHLIGASEMGLLSVAEECPTLQELELQCCSDNVLRGIAACANLQILKLVGRVDGFYNSVVSDIGLTILAQGCKRLVRLELCGCEGSFDGIKAIGKCCLMLEELTFSDHRMDDGWLAAISFCENLKTLRLQSCKRIDPNPGMEEYLGSCPALERLHLQKCQLRDKKSVSALFSVCRAVREIVLQDCWGLDNSIFCFAMMCRRVKLFYLEGCSLLTTEGFESVIHSWKELQSLRVVSCKNIKDYEISTALATLFTTLKELRWSPDTKSLLPSSVTGITMGKKGGKFFKRAR* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01093 490 PANTHER UNCHARACTERIZED 75 448 - -
Lapu11g01093 490 SUPERFAMILY RNI-like 257 460 - -
Lapu11g01093 490 CDD F-box_AtTIR1-like 74 110 - -
Lapu11g01093 490 SUPERFAMILY RNI-like 106 311 - -
Lapu11g01093 490 MobiDBLite consensus disorder prediction 1 22 - -
Lapu11g01093 490 FunFam F-box protein At5g51380 68 337 - -
Lapu11g01093 490 FunFam F-box protein 338 472 - -
Lapu11g01093 490 Gene3D - 72 110 - -
Lapu11g01093 490 SMART LRR_CC_2 196 218 IPR006553 -
Lapu11g01093 490 SMART LRR_CC_2 322 348 IPR006553 -
Lapu11g01093 490 SMART LRR_CC_2 349 374 IPR006553 -
Lapu11g01093 490 SMART LRR_CC_2 400 425 IPR006553 -
Lapu11g01093 490 SMART LRR_CC_2 219 241 IPR006553 -
Lapu11g01093 490 SMART LRR_CC_2 273 297 IPR006553 -
Lapu11g01093 490 Gene3D Ribonuclease Inhibitor 212 461 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01093 Lapu-Chr11 13064896 13066934 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01093 K10268 - gmx:100812193 793.497