Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01085 ATGGAAGGAGAAGTAAAGGTGTCTGCAGAAAATAAACAGAAAGGAAGGTTTCAAAGAATATGTGTCTTTTGTGGGAGTAGGGTGGGATATAGGTCTTCATTCAGTGATGCAGCTCTAGAGCTTGGTAAATTGCTGGTTGAAAGGAAGATTGATTTGGTTTATGGAGGAGGAAGATTAGGACTAATGGGTTTGATCTCTCAGACTGTGCAAAAGGGAGGTTGTCATGTTCTTGGTGTGATTCCTAAAGCTCTGCTGCCTCGTGAGATATCTGGAGAAACTTTTGGAGAAGTGAAAACAGTTGCAAATATGCATGAAAGGAAGTCAGTGATGGCTAAACATGCTGATGCGTTCATTGCCCTTCCTGGAGGCTATGGAACAATGGAAGAGTTGCTGGAGGTGATAGCCTGGTCCCAACTAGGGATACATGATAAACCAGTGGGTTTGTTGAATGTAGATGGGTATTTCAACAGCTTGTTGACCTTATTTGACAAGGGAGTTGAAGAGGGTTTTATAGACAACTCTGCAAGGCATATTGTAGTCATAGCAGACACAGCAGAAGAACTCATAAAGAAAATGGAGGAATATGTTCCCAACCATCACAAGGTTGCATCAAGACAAAGCTGGGCAACGGACCAATCATTATTAGAGACTACTGAAACTGGGGAGGTCCTATGA 675 0.4252 MEGEVKVSAENKQKGRFQRICVFCGSRVGYRSSFSDAALELGKLLVERKIDLVYGGGRLGLMGLISQTVQKGGCHVLGVIPKALLPREISGETFGEVKTVANMHERKSVMAKHADAFIALPGGYGTMEELLEVIAWSQLGIHDKPVGLLNVDGYFNSLLTLFDKGVEEGFIDNSARHIVVIADTAEELIKKMEEYVPNHHKVASRQSWATDQSLLETTETGEVL* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01085 224 PANTHER LOG FAMILY PROTEIN YJL055W 11 213 - -
Lapu11g01085 224 Pfam Possible lysine decarboxylase 62 192 IPR031100 -
Lapu11g01085 224 SUPERFAMILY MCP/YpsA-like 17 195 - -
Lapu11g01085 224 FunFam Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8 17 211 - -
Lapu11g01085 224 Gene3D - 5 194 - -
Lapu11g01085 224 NCBIfam Rossman fold protein, TIGR00730 family 19 195 IPR005269 GO:0009691|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01085 Lapu-Chr11 13015044 13017725 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01085 K22522 - gmx:100811032 395.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g01085 11 13015044 13017725 Lapu11g01085 11 13015044 13017725 ECH