Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01082 ATGACGAAGCTTGCAGGATATTCCCTGGCTGTTTCATTTGCTCCCATAAGTTCCAATATCCTTAAAAACAATTGCAGATTCCCAGTAGTTATATCTCGTAGGAATAAGTTCAGCTATAGGTTATTTTCTACTCATTCTCGGAAAGCACAATTACATGATAAGCCTGGAGTGGTGTCCAGATACTATCTTCCTCCTTGGTTTAGGTGTGTTGTTGCTCCAATGATGGAATGGACGGACAATCACTATAGGACTCTAGCACGCCTCATATCAAAACATGCTTGGCTGTACACGGAGATGGTTGCAGCTGAAACAATTGTTCATCAGAAGGACAATCTGGACAGATTCTTGGCATATTCTCCAGACCAACATCCCATTGTGCTTCAAATTGGAGGGAGTAATATAGAAAATTTGGCTAAAGCAACTGAGCTTGCTAATGCTTATTGCTATGATGAGATCAACTTAAACTGTGGATGCCCTAGTCCAAAAGTTGCTGGGCATGGGTGTTTTGGTGTGAGTCTCATGCTTAACCCCAAGTTTGTTGCCGAGGCCATGTCTGCAATTGCTGCCAGCACAGATGTACCTGTCAGTGTCAAATGTAGAATTGGCGTGGATGATCATGATTCTTACAATGAGCTTTGTGATTTCATATACCAGGTTTCTTCTTTATCACCTGCTAAGCATTTTATAATTCACTCAAGGAAGGCACTGCTCAATGGTATTAGCCCTGCTGAAAATAGGAGCATTCCTCCGCTAAAATATGAATACTTCTATGGCCTCTTACGTGACTTTCCTGACCTAACATTTACAATCAATGGCGGCATTACTAGTGTTGAAGAGGTCCGTGCATCTCGAGAAGCTGGGGCTCATGGTGTTATGGTTGGACGTGCAGCATACAACAACCCTTGGAATATTTTGGGACACGTAGATTCCGCAATTTATGGTACACCAAGCTGTGGTCTTACACGTCGTCAGGTCCTTACAAAATATCTAGCCTATGGGGAGTCGGTCTTGGGAAAATATGGACGTAGGCCAACTATGCGAGATATTGTAAAGCCTTTACTAAATCTTTTCCACTCAGAACCTGGGAATGGACTTTGGAAGCGCAAAGCTGATGCTGCTTTCAAAAATTGCGCGACAGTCGAATCATTTTTTGAAGAAACCCTTGTGGCAATTCCCGACTCAGTATTGGATTCGCCTGTTGCCAAACTACCACCTGGTCGTAGTGATCTTTTTGTCAACATAAACAATTTATTGCCTCCGCCATACAGAACAAGAGAAGAAGCGATAGTCATTTGCGCTTAA 1302 0.4278 MTKLAGYSLAVSFAPISSNILKNNCRFPVVISRRNKFSYRLFSTHSRKAQLHDKPGVVSRYYLPPWFRCVVAPMMEWTDNHYRTLARLISKHAWLYTEMVAAETIVHQKDNLDRFLAYSPDQHPIVLQIGGSNIENLAKATELANAYCYDEINLNCGCPSPKVAGHGCFGVSLMLNPKFVAEAMSAIAASTDVPVSVKCRIGVDDHDSYNELCDFIYQVSSLSPAKHFIIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVEEVRASREAGAHGVMVGRAAYNNPWNILGHVDSAIYGTPSCGLTRRQVLTKYLAYGESVLGKYGRRPTMRDIVKPLLNLFHSEPGNGLWKRKADAAFKNCATVESFFEETLVAIPDSVLDSPVAKLPPGRSDLFVNINNLLPPPYRTREEAIVICA* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01082 433 Gene3D Aldolase class I 67 308 IPR013785 -
Lapu11g01082 433 PANTHER FMN-LINKED OXIDOREDUCTASES SUPERFAMILY PROTEIN 62 427 IPR004653 GO:0002943|GO:0017150
Lapu11g01082 433 Pfam Dihydrouridine synthase (Dus) 71 379 IPR035587 -
Lapu11g01082 433 CDD DUS_like_FMN 70 302 IPR035587 -
Lapu11g01082 433 FunFam tRNA-dihydrouridine(20/20a) synthase 67 313 - -
Lapu11g01082 433 Gene3D - 319 381 - -
Lapu11g01082 433 SUPERFAMILY FMN-linked oxidoreductases 68 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01082 Lapu-Chr11 12994035 13000524 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01082 K05539 - gmx:100779457 786.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g01082 11 12994035 13000524 Lapu11g01082 11 12994035 13000524 ECH