Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01080 ATGGGATTTGATAATGAGTGCATAGTGAACATTCAATCTCTTGCTGGAGAGTACTTCTGTCCTGTGTGTAGGCTGCTTGTATTTCCAAATGAAGCTTTGCAGTCACAGTGTACTCATTTATACTGCAAGCCGTGTTTGACCTATGTTGTGAGCACTACAAAGGCTTGCCCATATGATGGATATTTGGTCACCGAGGCAGATTCCAAGCCTCTGACAGAGTCAAATAAGACCCTTGCTGAAACTATTGGAAAAATAGCAGTTCATTGCCTTTATCACAGGAGTGGGTGCACATGGCAAGGAACTTTGTCTGAGTGCACATCTCATTGTTCTGGATGTGCTTTTGGCAATTCTCCTGTAGTTTGTAATAGGTGTGGGATCCAAATAGTGCATCGCCAAGTACAAGAACATGCACAAAATTGCCCTGGTGTGCAAGGTCAGGCACAACAGGTGACCACTACCCAGGATCCTTCAACTATTAGTGTTGTTGCTTCTACGGATCAGAACCAGAATGCTGTTCCAGTTGCAGCAACTGCAGCACAAGCTGCTGTCACAACTACGGTGCCTGGGCAGATTTCAAATCAGCAACCCAATCTTACGCCCCAAACACAAGCTTTAGTTCAAACTGCCGGGCAGCCAACGGCAGAGCAATGGTATCAGCAGCAACAGTATCAACAATACTACCAGCAATACCCTGGACAAGATCCATACCAACAGCAGTACCAACATTACTATCCCTATCAACAGTCCATGGTTCCACAGTACCAGCAGGCCTATGGTCAGCCCCAACCTCAGTCTCAGTCACAGCCCCCAGCCCAGCTTCAACCTCAGCCCCAGCCACAGGCCCAACACCAATCACAGCAGCCTCAACTTCAACCACAACCTCAGGCTCAAGGACTTTCTCAACCACCTTCACATATACAGGCTCCTGTCGTCCAACCATCTCAGAATCAGATGCAAGTTCAACAACAACCTCAGCAACTTCAACCTGCTGTGCAGCCACATGGGCAGACAAGTCATGCACCTGGCCACGCCCTTCCTCAATCTCAGACTCAGCCCTATCCTTACCCTCAAGTTCAGCCTCATTCTGTCCAACCTCAACCCCAACAACCTATGCAAATTCCTCCATATCAGCAGCCTCTTCCTCAAATGCAGCAATCACAACCTCAAATTCATCAACCTGTTCAGAAGTATCCTGTTCCACAATCTCAAGTTCATGCACAACTGCAACCTAATGCTCCAGTTCATCATCCCTCTCAGCTCCCAATGCCTCCTCACCATCCTGTGACACCTAATGTGCAGCCTCAAGTGCAAAATGCGACGTCACATTCAGTGACAGGGCATCACTCGTATCCGCAACCTCTGCCTCACCCAAATATGCAACCAGGAGTTCCTCAACATACTATGCACATGCATCCTCAAAGTGGGCCCCAACCACAGGCTCAACACCCTGTCCAGATGCAGAATCAGTTTCCTCCGCAAATTCCAACCATGCGTCCTAACCAATCTCATGCTATGTTTCCTAACCAGCAACCATCTGTTCAGGGCCAAACTACCCCTCCTTTGCAACAACAGCCCGTGTATTCCCATAATCAACAACCTGGACAAATCAACCAACGTCCTACTCTGCAACCTGTTCAACAAATACCTCAGCAGCAGCCATTTGCACAACACCAAATGCATATGCCATCTCATTTACGACCACTGGGTCCAGCACATTCATTTCCCAAACATGTCTATTCACAGCCACAGGGTAATATTGCAACATCAAATAACATTCAGCACAGTCAATCTCAAAATGCTGGAGGAAGGCCTTTAGTTCCTAACCATGCAGGACACCTACAGCCATTTGCACAATCTGCCAATACTATTCCTGTTAGACATGGGCAAAATGGTGCTGGCTACATGCTTGAAAATCAGAAATTGTTGGCTGGTACCAATAATCAAGTACAGTTGCCTTCTGAATTGCAGTCTAGGGCACCAGAAACAATTGAAAGACATGGTGATGTTGTTGAACAACAAACTGACTCTGCCTCTGGTAAACTGAGTAACAATTTCAAAGATTTAGACAAAGTGTCTGGATCAGCGAATGAGTTGAAATCTGAAAAATTCGAAGCAAATTTGAAACCAATAGAGGTCGGGAATATGACAAATAATGAAGATCCAGTAATTAAGACTTCAGTCCCAAATGCCAATGCAGTAGAAAATGGTGATTCTGTGAATAAGAATCTTGCGATGGTGGTGGCTGCTGAAAGCAATTGGAATCCTTCAATTAGTAAAAAAGCTGGTGGTTCAATGCTCGGGGTTCAAAATGACAGTAATGGGCACTCTGTCCAAGGCAATGAATTTCAAGAAGGACATCCACCAAAGACAGAGACAAAACTCCCTGACTCAGAAACTGATAAATTACACAATGATGACAATCCTGCGCCTTCTAACTCTCAAAGCAATGGGAGTTTTGCTCAGCTGTCTCATTCAGCCACTTTCACCGAGCAGAGTAAGCATCAACAACCAATGACTAATTATGGGCCTCCTGTCCAGCAGAGATCTTCTGCAATGTTAGCATCACAATTGCCACACCCGACAGTTCCGACCCAGCCACTCTCTTCATTGCACTCTTCAGCCCTAGTCAGGAATCATGGATCTGCTCATGATCCTATGCCAACCATGTTTAAGCAACCACTAGATTCTGACATTACTCCTGGACGAAACTTTCAACCTCAGTCTCTTGGACCCCCGCAACCATTTAATCAAGGCCACGAGCCTCCTTTCCATGCCGGAGCATCCAATTTGTCTCGTCTTGGAGGGCCTCAATTTGGTGCACCACTTCCTGGAGATATGCATGGTCGAATGGCAGCCGACTTACCACCACATGGTCCTGAAGGTTTTGGTTTGCATGATGAACGGTTCAAACCTTTCCTTGTTTCAAATCAACAAAATATTGACAGAAGAGAGTATGATGATGATCTTAAGAAATTCTCTAGGCTGCCTTTGGATGCCGAGTCAATTTCCAAATTTGGAAATTATTCATTAAGTGCACATGAATCTGGAAAGAGATCAGTTGGTGCTCATGATGATGTCATTAAGAAATCAGGTTCTATGCTTCATCCTGGTTATCTTGGACCAGGTCCTGGATATGGAAGACGTCATATGGATGGTATGACTCCAAGAAGTCCTGTTGGTGAATATGCTGAGATGTCCTCCCGGAGATTGGGGGCCCACTCTGGTAGTCGTGTTGGAAAGTCAGGTATAGATGATTTTGATGGTAGAGTTGCTCGACGTTTTGGTGCTGAGTTCCATGATAGTCGGTTTCCTCATTTGCCTAACCATTTGCATAGAGATGAATTTGATGGTTTTGGTAACTTCCGAATGGGTGAACATCCAAGGAGTGGTGATTTCATTGGTCAAGATGAATTTACTGGCCATTTTCGTAGGGGTGAACCTTTGGGTCCTCATAATTTTCCTAGACATCTGCAGCTTGGGGAGCCTCTTGGTTTTGGTGCGCATCCTGGTCATATGAGAGCAGTTGAACATGGCGATTTTCGTAGTTTTGAATCTTTTGGAAAAGGCAACCGGCCAGGTCATCCACAACTTGGTGAGCCTGGGTTCAGAAGCAGCTTTTCTCTTCCTGGATTTCCTAATGATGCTGGATTTTTAACAGGAGATATCAGGTCGTTTGATAATTTGAGGAGAAGGAAGGCTTCCAGCATGGGATGGTGCCGGATATGTAAAGTTGACTGTGAAACAGTAGAAGGTCTGGACTTGCATTCACAAACAAAGGAGCACCAGAAGATGGCTATGGATATGGTTAAGACAATCAAACAAAATGCAAAGAAACAGAAGTTAATACCAGGTGAACAACCTACAGCTGATGAGGGAAACAAGACACACAATACTGGTTTTGAGAGTCGTGGAAATAAGCATTGA 3924 0.4536 MGFDNECIVNIQSLAGEYFCPVCRLLVFPNEALQSQCTHLYCKPCLTYVVSTTKACPYDGYLVTEADSKPLTESNKTLAETIGKIAVHCLYHRSGCTWQGTLSECTSHCSGCAFGNSPVVCNRCGIQIVHRQVQEHAQNCPGVQGQAQQVTTTQDPSTISVVASTDQNQNAVPVAATAAQAAVTTTVPGQISNQQPNLTPQTQALVQTAGQPTAEQWYQQQQYQQYYQQYPGQDPYQQQYQHYYPYQQSMVPQYQQAYGQPQPQSQSQPPAQLQPQPQPQAQHQSQQPQLQPQPQAQGLSQPPSHIQAPVVQPSQNQMQVQQQPQQLQPAVQPHGQTSHAPGHALPQSQTQPYPYPQVQPHSVQPQPQQPMQIPPYQQPLPQMQQSQPQIHQPVQKYPVPQSQVHAQLQPNAPVHHPSQLPMPPHHPVTPNVQPQVQNATSHSVTGHHSYPQPLPHPNMQPGVPQHTMHMHPQSGPQPQAQHPVQMQNQFPPQIPTMRPNQSHAMFPNQQPSVQGQTTPPLQQQPVYSHNQQPGQINQRPTLQPVQQIPQQQPFAQHQMHMPSHLRPLGPAHSFPKHVYSQPQGNIATSNNIQHSQSQNAGGRPLVPNHAGHLQPFAQSANTIPVRHGQNGAGYMLENQKLLAGTNNQVQLPSELQSRAPETIERHGDVVEQQTDSASGKLSNNFKDLDKVSGSANELKSEKFEANLKPIEVGNMTNNEDPVIKTSVPNANAVENGDSVNKNLAMVVAAESNWNPSISKKAGGSMLGVQNDSNGHSVQGNEFQEGHPPKTETKLPDSETDKLHNDDNPAPSNSQSNGSFAQLSHSATFTEQSKHQQPMTNYGPPVQQRSSAMLASQLPHPTVPTQPLSSLHSSALVRNHGSAHDPMPTMFKQPLDSDITPGRNFQPQSLGPPQPFNQGHEPPFHAGASNLSRLGGPQFGAPLPGDMHGRMAADLPPHGPEGFGLHDERFKPFLVSNQQNIDRREYDDDLKKFSRLPLDAESISKFGNYSLSAHESGKRSVGAHDDVIKKSGSMLHPGYLGPGPGYGRRHMDGMTPRSPVGEYAEMSSRRLGAHSGSRVGKSGIDDFDGRVARRFGAEFHDSRFPHLPNHLHRDEFDGFGNFRMGEHPRSGDFIGQDEFTGHFRRGEPLGPHNFPRHLQLGEPLGFGAHPGHMRAVEHGDFRSFESFGKGNRPGHPQLGEPGFRSSFSLPGFPNDAGFLTGDIRSFDNLRRRKASSMGWCRICKVDCETVEGLDLHSQTKEHQKMAMDMVKTIKQNAKKQKLIPGEQPTADEGNKTHNTGFESRGNKH* 1308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01080 1307 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 6 119 IPR013083 -
Lapu11g01080 1307 SUPERFAMILY TRAF domain-like 84 141 - -
Lapu11g01080 1307 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 1A-LIKE 1013 1306 - -
Lapu11g01080 1307 MobiDBLite consensus disorder prediction 898 914 - -
Lapu11g01080 1307 MobiDBLite consensus disorder prediction 578 603 - -
Lapu11g01080 1307 MobiDBLite consensus disorder prediction 893 943 - -
Lapu11g01080 1307 MobiDBLite consensus disorder prediction 277 357 - -
Lapu11g01080 1307 CDD RING-HC 18 57 - -
Lapu11g01080 1307 MobiDBLite consensus disorder prediction 560 609 - -
Lapu11g01080 1307 MobiDBLite consensus disorder prediction 1277 1307 - -
Lapu11g01080 1307 MobiDBLite consensus disorder prediction 416 430 - -
Lapu11g01080 1307 MobiDBLite consensus disorder prediction 786 805 - -
Lapu11g01080 1307 MobiDBLite consensus disorder prediction 760 849 - -
Lapu11g01080 1307 MobiDBLite consensus disorder prediction 760 785 - -
Lapu11g01080 1307 SUPERFAMILY RING/U-box 17 67 - -
Lapu11g01080 1307 MobiDBLite consensus disorder prediction 470 537 - -
Lapu11g01080 1307 ProSitePatterns Zinc finger RING-type signature. 37 46 IPR017907 -
Lapu11g01080 1307 MobiDBLite consensus disorder prediction 806 849 - -
Lapu11g01080 1307 ProSiteProfiles Zinc finger RING-type profile. 20 59 IPR001841 -
Lapu11g01080 1307 MobiDBLite consensus disorder prediction 378 414 - -
Lapu11g01080 1307 MobiDBLite consensus disorder prediction 358 377 - -
Lapu11g01080 1307 MobiDBLite consensus disorder prediction 255 537 - -
Lapu11g01080 1307 MobiDBLite consensus disorder prediction 431 448 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01080 - - gsj:114380210 1909.42