LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu11g01051	ATGGTCTCCACGGAATCGTCTCTTCTCCTTCCCTCAGCTTCCAACAGCAGCAGCAGGAACAACAATGTTCCTGAAGACAAATGGGATTTAGCGTACATAGTGTATTTCACCCTCGGACTCGGTTACCTTCTCCCATGGAACGCTTTCATCACAGCCGTTGATTACTTCTCCTATCTCTACCCCGACGCCAGCGTTGACCGCTCCTTCGCCGTCGTTTACATGCTCATCGGCCTCGTCGGAATCACCCTCATCGTCCTCTACAGCCACACCTCCAAAGCCTTTCTCAGAATCAACGTTGGTTTGGCCCTGTTCGTCGTTTCACTCCTCATCGTTCCCCTAATCGATGCCTTCTACGTCAAGGGTCGTGTCGGACTCTCCGGCGGATTCTACGCCACCGCCGCCGCCGTCGGCCTCTCCGCCGTCGCTGATGCCCTCGTGCAGGGCTCCATTGTTGGCTCCGCTGGCGAGCTTCCGGAGAGATACACGCAAGCTGTCATCGCCGGCACCGCTGGTTCTGGGGTGCTTGTTTCTGTCCTGAGGATAATTACAAAAGCTGTTTACTCACAAGATGCCTCTGGCCTACGGAAGAGTGCAAATCTCTACTTCTCTGTATCAATCGTGATTGTGTTCATATGCATGGTTTTATACAACCTGGTGCACAAACTTCCTATCATGAAGTACTACAATGAACTTAAGGTTGAGGCAGCCGCTGCGAATGAAGACAGTGGTCCCCCCACAGGAGCTGTCTGGAGGTCAACTGTATGGGATATTGTGGGAAGCATCAAGTGGTATGGATTTGGCATTGTGCTCATTTATGTTGTGACTCTGGCGATTTTTCCTGGTTACATTACTGAGGATGTGCAGTCTGAAATCCTTAAGGATTGGTATCCAATTCTCCTAATTACTGCCTATAATGTGTTTGATCTGGTTGGCAAGTCTCTGACAGCAGTTTACCTCCTACAGAATGCAAAAGTTGCAGTAGTTAGTTGCATAGTGAGATTGCTGTTTTTCCCTCTCTTCTTAGGGTGCTTGCATGGTCCCCAATTCTTCCGGACTGAGATTCCCGTGACGATACTAACGTGCCTTTTAGGGCTTACTAATGGCTACCTAACCAGTGTATTGATGATTCTGATTCCTAAAGTTGTAAAGTTGCAGCATGCAGAGACTGCAGGGATTGCGAGTGTATTATTCTTAGTTTTTGGTCTGGCTGCTGGGTCTGTTGTAGCTTGGTTTTGGGTCATCTGA	1245	0.4916	MVSTESSLLLPSASNSSSRNNNVPEDKWDLAYIVYFTLGLGYLLPWNAFITAVDYFSYLYPDASVDRSFAVVYMLIGLVGITLIVLYSHTSKAFLRINVGLALFVVSLLIVPLIDAFYVKGRVGLSGGFYATAAAVGLSAVADALVQGSIVGSAGELPERYTQAVIAGTAGSGVLVSVLRIITKAVYSQDASGLRKSANLYFSVSIVIVFICMVLYNLVHKLPIMKYYNELKVEAAAANEDSGPPTGAVWRSTVWDIVGSIKWYGFGIVLIYVVTLAIFPGYITEDVQSEILKDWYPILLITAYNVFDLVGKSLTAVYLLQNAKVAVVSCIVRLLFFPLFLGCLHGPQFFRTEIPVTILTCLLGLTNGYLTSVLMILIPKVVKLQHAETAGIASVLFLVFGLAAGSVVAWFWVI*	415

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu11g01051	414	MobiDBLite	consensus disorder prediction	1	21	-	-
	Lapu11g01051	414	PANTHER	EQUILIBRATIVE NUCLEOSIDE TRANSPORTER	19	412	IPR002259	GO:0005337\|GO:0016020\|GO:1901642
	Lapu11g01051	414	Pfam	Nucleoside transporter	135	413	IPR002259	GO:0005337\|GO:0016020\|GO:1901642
	Lapu11g01051	414	PIRSF	ENT	4	414	IPR002259	GO:0005337\|GO:0016020\|GO:1901642
	Lapu11g01051	414	PRINTS	Delayed-early response protein/equilibrative nucleoside transporter signature	121	141	IPR002259	GO:0005337\|GO:0016020\|GO:1901642
	Lapu11g01051	414	PRINTS	Delayed-early response protein/equilibrative nucleoside transporter signature	390	414	IPR002259	GO:0005337\|GO:0016020\|GO:1901642
	Lapu11g01051	414	PRINTS	Delayed-early response protein/equilibrative nucleoside transporter signature	300	321	IPR002259	GO:0005337\|GO:0016020\|GO:1901642

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu11g01051	Lapu-Chr11	12794354	12796416	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu11g01051	5	414	Organic Solute Cotransporters	AT1G70330	65.860	0.0	536

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu11g01051	K15014		-	gmx:100793043	687.952