Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01050 ATGAATCAATCAGACTTCAATCTCTCTTCTCAAAATTTTATTTCAATCACACACAGCGTACGTAGATCTGCAAACTATAAACCAAACATATGGAAACACCACTTTTTGCAGTCACTCACCAGTAACTATCATAAGGAAGAATTTGTTATGCTGTTAAACAAGGGTGTGATGGAAGTGAAAAGTCTATTTGTCCAAGAGACAGATATCTTGAAGAAGTTAGAGTTGGTTGATTGGATCCAAAAACTAGGCCTTGCTAACCATTTTCAAAAGGAAATCAATGGCTTTCTTGAATATATACTTGTCTGTGTCAAAACCAGCAACATTAGTCAACAAGACTTGCACGTATCTGCATTATGCTTCAGGCTTCTAAGAAATCATGGATATGCAGTTTTGCCTGATATATTAAGCAAGTTTTTAGATAAAAAGGGTAATGTGATGAGGGTAATAAGTGCTGGCGATGCTAAAGATGTTATGGAGCTTCTTGAGGCCTCACATTTAGGCTTGGAAGGAGAAAAGATATTGGATGAGGCAAAAATTTGTGCCATAAATTCTCTCAAGGGTAATTTCTCTCTCAGTCCCATCAAGAAGGACCAACTATCTAATAATGTAGATGCTGAAATGGTCCACTCACTGGAGCTTCCGTCCCATTGGAGACTACAGTGGTTTGAAGTCAAATGGCACGTGGAGAAATACAAGAAGTCGAAAAATATGGACCCCATTTTACTTGAACTCTCTAAATTAAATTTCAATATGATTCAGGCCACACTTCAATTGGAGCTTAAGGAATTATCCGGGTGGTGGGAGAATCTTGGCATAAAAAAAGAATTGAGCTTTGCAAGGAACAGATTGGTTGAAAGTTTCATGTGTGCAGCAGGAGTTGCTTTTGAGCCCAAGTACAAATCCATCAGAAAATGGCTCACTAAAGTTATTGTTTTCGTACTAGTCATCGATGATGTTTATGATATACATGCCTCATTTGAAGAGTTGAAGCCCTTCACCATGGCGTTTGAGAGATGGGACGACACAGAACTAGAAGAACTTCCAACGTACATGAGAACATGCGTCCATGCACTTAAAGATGTCACAAATGAAATTGCCTATGAAATTGGTGGAGAAAATAACTTTCACTTGGTGTTACCTTACCTGAAGAAAGCGTGGATAGACTTTTGCAAAGCATTGTACGAGGAGGCAAAGTGGTACAACAAGGGACAGATTCCATCGTTGCAAGAATATTTAAGCAATGCATGGATTTCATCTTCGGGACCAGTAATTTTACTCCATTCATATCTTGGAACAATGTACCAAGTAAAGGATTCCATGGACGATTTCCTGCAGAAGTACGAGGATCTGGTCTACAACGTGTCTCTTGTCATCAGACTTTGCAATGATTTAGGGACCACGGTGGCTGAAAGAGAAAGGGGTGACGCTGCTTCATCAATCGTATGCTGTATGAATGAAAAGGGCGTTTCAGAGGAGAAAGCAAGAAAGCATATTGAAGATAAAATCGTTGAAGCATGGAAAAAGATAAACGAGAAGTGTTTTGCTTCTTCTTGTTGGATGCAGCCATTTCTTAGTCAAGCAATAAACGCAGCTCGAGTGGCCCATACCCTTTATCAAAATGGAGACGGTTTTGGAATCCAAGATCGAGATATCAAAAAACATATCTTGTCACTAGTTGTTGAACCCCTTTAA 1692 0.3918 MNQSDFNLSSQNFISITHSVRRSANYKPNIWKHHFLQSLTSNYHKEEFVMLLNKGVMEVKSLFVQETDILKKLELVDWIQKLGLANHFQKEINGFLEYILVCVKTSNISQQDLHVSALCFRLLRNHGYAVLPDILSKFLDKKGNVMRVISAGDAKDVMELLEASHLGLEGEKILDEAKICAINSLKGNFSLSPIKKDQLSNNVDAEMVHSLELPSHWRLQWFEVKWHVEKYKKSKNMDPILLELSKLNFNMIQATLQLELKELSGWWENLGIKKELSFARNRLVESFMCAAGVAFEPKYKSIRKWLTKVIVFVLVIDDVYDIHASFEELKPFTMAFERWDDTELEELPTYMRTCVHALKDVTNEIAYEIGGENNFHLVLPYLKKAWIDFCKALYEEAKWYNKGQIPSLQEYLSNAWISSSGPVILLHSYLGTMYQVKDSMDDFLQKYEDLVYNVSLVIRLCNDLGTTVAERERGDAASSIVCCMNEKGVSEEKARKHIEDKIVEAWKKINEKCFASSCWMQPFLSQAINAARVAHTLYQNGDGFGIQDRDIKKHILSLVVEPL* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01050 563 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 27 236 IPR008930 -
Lapu11g01050 563 Gene3D Farnesyl Diphosphate Synthase 28 553 IPR008949 -
Lapu11g01050 563 Pfam Terpene synthase family, metal binding domain 242 508 IPR005630 GO:0000287|GO:0010333|GO:0016829
Lapu11g01050 563 CDD Terpene_cyclase_plant_C1 21 562 IPR044814 GO:0010333|GO:0016102
Lapu11g01050 563 Gene3D - 67 237 IPR036965 GO:0010333|GO:0016829
Lapu11g01050 563 PANTHER OS04G0344100 PROTEIN-RELATED 19 543 - -
Lapu11g01050 563 Pfam Terpene synthase, N-terminal domain 30 204 IPR001906 GO:0010333|GO:0016829
Lapu11g01050 563 SUPERFAMILY Terpenoid synthases 237 563 IPR008949 -
Lapu11g01050 563 FunFam Isoprene synthase, chloroplastic 216 553 - -
Lapu11g01050 563 SFLD Terpene Cyclase Like 1 C Terminal Domain 239 562 IPR034741 -
Lapu11g01050 563 SFLD Isoprenoid Synthase Type I 239 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01050 Lapu-Chr11 12787600 12790615 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01050 K14173 - gmx:100812119 859.366