Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01022 AAAAGGATGGCATCGGTCACACATATTCCATCAGCAGCTGCTGCTACTAGCAAGAAGGAGATGTCAATGGAGCAACACCAGAAGGAGAAGGAGAAACTGCAGAAGGGAATCGCTGAGTTCTACGACGAGTCCTCTAGCATATGGGAGAATATCTGGGGCGACCACATGCACCATGGCTTCTACGACCCAGATTCCACCGTTTCGGTTTCGGATCATCGCGCTGCTCAGATCCGAATGATCCAAGAGTCGCTTCGTTTTGCCTCTGTTTCTGAGGAGCGTAGTAAATGGCCCAAGAGAATAGTTGATGTTGGGTGTGGCATAGGGGGCAGCTCCAGATACTTGGCCGAGAAATTTGAGGCAACCAGTGTTGGCATCACTCTCAGTCCTGTTCAAGCTCAAAGAGCAAATGCTCTTGCTGCTGCTCAAGGATTGGCCCACAAGGTTTCTTTTCAGGTTGCTGACGCTCTGCAGCAACCATTCCCTGATGGGCAGTTTGATCTGGTGTGGTCCATGGAAAGTGGAGAGCATATGCCTGACAAAACTAAGTTTGTGGGAGAGTTAGCTCGGGTAGCAGCACCAGGTGGCACCATAATAATAGTAACATGGTGCCACAGGGATCTTGGCCCTGACGAACAATCCCTACAAGCATGGGAGCAAGATCTGCTGAAGAAGATCTGTGATGCATATTATCTTCCAGCTTGGTGCTCAGCTTCTGATTATGTCAAATTGCTGAAATCCCAGTCACTTCAGGATATAAAGTCAGCAGATTGGTCTCCCTTTGTTGCTCCATTTTGGCCAGCAGTGATACGTTCTGCGTTGACATGGAATGGCCTCACTTCACTCTTGCGCAGTGGGCTAAAAACCATTAAAGGAGCTTTGGCTATGCCATTGATGATAAGAGGATACAAGAATAATTTGATTAAGTTTGTCATCATTACATGTAGAAAACCTCAATAA 957 0.4734 KRMASVTHIPSAAAATSKKEMSMEQHQKEKEKLQKGIAEFYDESSSIWENIWGDHMHHGFYDPDSTVSVSDHRAAQIRMIQESLRFASVSEERSKWPKRIVDVGCGIGGSSRYLAEKFEATSVGITLSPVQAQRANALAAAQGLAHKVSFQVADALQQPFPDGQFDLVWSMESGEHMPDKTKFVGELARVAAPGGTIIIVTWCHRDLGPDEQSLQAWEQDLLKKICDAYYLPAWCSASDYVKLLKSQSLQDIKSADWSPFVAPFWPAVIRSALTWNGLTSLLRSGLKTIKGALAMPLMIRGYKNNLIKFVIITCRKPQ* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01022 318 PANTHER METHYLTRANSFERASE 42 280 - -
Lapu11g01022 318 Pfam Methyltransferase domain 101 199 IPR013216 GO:0008168
Lapu11g01022 318 Coils Coil 23 43 - -
Lapu11g01022 318 MobiDBLite consensus disorder prediction 1 29 - -
Lapu11g01022 318 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 32 317 IPR029063 -
Lapu11g01022 318 ProSiteProfiles SAM-dependent methyltransferase gamma-tocopherol (gTMT)-type family profile. 21 318 IPR025774 GO:0008168|GO:0032259
Lapu11g01022 318 Gene3D Vaccinia Virus protein VP39 12 315 IPR029063 -
Lapu11g01022 318 CDD AdoMet_MTases 99 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01022 Lapu-Chr11 12555684 12559249 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01022 98 203 Acyl Lipid Metabolism Gene Families AT1G73600 37.736 1.48e-18 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01022 K05928 - gmx:100792443 526.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g01022 11 12555684 12559249 Lapu11g01022 11 12555684 12559249 ECH