Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00984 ATGGGTCAAGCTTTTCGGAAGCTCTTCGATACCTTCTTCGCCAATACCGAGATGCGGGTTGTGATGCTTGGTCTTGATGCTGCTGGCAAAACTACTATACTATACAAGCTCCACATTGGAGAAGTTTTGTCTACTGTTCCTACAATTGGTTTTAATGTGGAGAAGGTTCAGTATAAGAATGTTGTTTTCACAGTTTGGGATGTTGGAGGGCAAGAGAAATTAAGGGCACTTTGGAGGCACTATTTCAACAACACCGATGGTTTGATATATGTTGTTGATAGTCTTGACCGTGAAAGGATAGGAAAAGCTAAGCAGGAATTTCAGACAATCATAAATGATCCGTTTATGCTCCACAGTGTAATATTGGTGCTTGCTAACAAACAGGACCTGAAAGGAGCAATGTCAGCAAGGGAAGTATGTGAAGGATTAGGTCTCTTTGATCTCAAGAATAGAAAGTGGCACATACAAGGCACTTGTGCTCTCCGGGGAGATGGCCTTTATGAGGGCTTGGATTGGCTGTCAGCAACTCTGAAGGAGAGAAAAGCTGCCGGATACTCTTCAATAGGACTTGGAACTTCATCCTTCTAA 588 0.4286 MGQAFRKLFDTFFANTEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVVFTVWDVGGQEKLRALWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQTIINDPFMLHSVILVLANKQDLKGAMSAREVCEGLGLFDLKNRKWHIQGTCALRGDGLYEGLDWLSATLKERKAAGYSSIGLGTSSF* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00984 195 ProSiteProfiles small GTPase Arf family profile. 11 177 - -
Lapu11g00984 195 CDD Arf1_5_like 18 176 IPR045872 GO:0003924
Lapu11g00984 195 PRINTS GTP-binding SAR1 protein signature 47 71 IPR006689 GO:0003924|GO:0005525
Lapu11g00984 195 PRINTS GTP-binding SAR1 protein signature 119 140 IPR006689 GO:0003924|GO:0005525
Lapu11g00984 195 PRINTS GTP-binding SAR1 protein signature 19 42 IPR006689 GO:0003924|GO:0005525
Lapu11g00984 195 PRINTS GTP-binding SAR1 protein signature 74 99 IPR006689 GO:0003924|GO:0005525
Lapu11g00984 195 SMART arf_sub_2 1 181 - -
Lapu11g00984 195 SMART rab_sub_5 18 180 - -
Lapu11g00984 195 PANTHER ADP RIBOSYLATION FACTOR-RELATED 8 173 IPR024156 GO:0005525
Lapu11g00984 195 Pfam ADP-ribosylation factor family 7 176 IPR006689 GO:0003924|GO:0005525
Lapu11g00984 195 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 181 IPR027417 -
Lapu11g00984 195 Gene3D - 3 187 IPR027417 -
Lapu11g00984 195 FunFam ADP-ribosylation factor 2 4 186 - -
Lapu11g00984 195 SMART sar_sub_1 3 177 IPR006689 GO:0003924|GO:0005525
Lapu11g00984 195 NCBIfam small GTP-binding protein domain 16 136 IPR005225 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00984 Lapu-Chr11 12277335 12281560 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00984 K07937 - gmx:100499903 386.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00984 11 12277335 12281560 Lapu11g00984 11 12277335 12281560 ECH