Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00980 ATGATGGATTGCGGCGTTGGATCCATCGTGTGGGTGCGTCGGAGGAACGGGTCGTGGTGGCCGGGTCAAATCCTTGGCCCCGACGACCTCTCCGCTTCTCACCTCACCTCACCCCGATCCGGAACCCCCGTCAAGCTCCTCGGCAGAGAAGATGCCAGCGTGGATTGGTACAATTTGGAGAAATCCAAGCGTGTTAAGGCATTCCGGTGTGGTGAGTTTGATGATTGTATTGAAAAGGCCGAATCTGCTCAGGGGGGACCGCTGAAGAAGAGAGAGAAGTATGCGCGCCGAGAAGACGCCATTCTTCATGCTCTTGAGCTTGAGAAACAGATTTTGAAGAAGCATGGGAGATCAGGTACTAGACCATCAAATACTTTTAAAAAGGGTGTAGTTGCATCGCCACCGGAAACACTGGGAAATGACAATGAAAACCATGCAAATTCGTTTATGTATTATGAGAGTGAGTCTGCTGGAGGTTTCTTTCCTCCAGAGATGCCTAAGGATGGCAATACGCTGCGCGGGGAAGTGGATTATTCTGAAACAACACCTCGGATGAGAGACTTGCAGGATTTTGGGCTCAGAATTGCCCCTGCAAAAAAGAAGCTTCCATCTTTTGTTGATCCTAACATTTATCAGAAACGTACCGTTGAGGATGGTGCTCGGGCTCTTGCAAGCGTTGGTATACGCTCTGGGAGTGCTCTTCACATCAATGGGGCTGGGCAAACAGGAGCTTCACGAGCAAAGAGAAGCAGATGTGTGTATTTTCCGACCGAGTCCAGTGATTCTCTTGATTACAGAGAAACTCTACCCCGAGTTGAGATGTCACCTTCTCAACGCAGAAGGGAGTTTCCTTATCATGGTTCTATGGTTGGAGAGACTGAATATACTTTTATGGATGATGTTGAATCTGATTCTTCAGAAACAGCTTGTACTGATTCTGATTCTGATTCTTCTGAGACAGAACCAGACTTGGATGAAGAGATGACAATATTTTCAGCTTTCTTTCACATCATCCTTCATGCCTTTACTCAGGATGTTCCTATAACTGCAGAAAATGGTCATGATGCTGAAGATCACGAAAGCACTAGCAGTGAGGAGCTTGATGAATTAGCAAATTCCAGTGACATGCCTCACCTTTATCCTCGTGACTTAATAACATGTAATGAAGCTGTGTCTAAATGGCAACTTAAAGGGAAAAGGAATAATCGGAATCTTGTAAAGAGGTCTATTGGTGCTTCTGATGGAAAATGTATGACTTATGGAGCAGGAGCAGGTGTTGAAGGAAAGAGTAGTCATTTAAGGCACAATGTAATAGATCCAGGTTTGCACCGCTACAAATTTGATTTTGGTGATACCTTTGATGACGATGATCAAAATTTTGCACTGGAAGATGAATACCCTCTATCTTCTAAATCCATATCAAGAAGTCAAAGTAAAATTCATCGTGGTGTAGCTTGGAATGATTTGGCCTGGGATGATCATGGAGCTTCTAAAAGACAGTGGGATGTTAAAGCACATTCTCCATTGTATGGTGACCGTTATCATTTTGGTGGGAGAGTGAGGCCGATGCTAGTTAATGTAGATCTGAAGGTTCAAGCAAGCTATCGGAAAGAGTGTGTACCCTTCATTTCTCTCATGAGTAAATTAGATGGAAGGGCAATAGTAGGGCACCCAATCCAGGTTGAGGCTCTCAAGGATGGTTCATCTGATATTCTATTTCCTTCAATTGATGACTTCAGTAATGATGGGGCTGGTATTGAGGGAAGTAGTGTGCTTCCACCAGCATGGAGAACTGCAAGGAGAACTGCAAATTTTCGCATCCCGCGCCCCCATGTGCCATCATCAAATGGTGCTGAAGGTGCGGCTGATTTTCCCACTTCAGATCAAGAACAAAGTTTTGAATACAAGAGTTTAAATGCTGGAAGTTCCAGTCTCCAGGCTAGCCTTCAAAAAAAGAGTGGCCTTAAAAGTCATCGTTCTTCAGCTGACAAAAGGTCTTTGAAAAAGCTGCCAAAGAAATTGAGCTTGTCATCTTGCCAAAAAACTCGAACTCTGTCCTCGTTATCTACTGAGCATAATTTTAGTAGAAAGCCATTACATGATAGCAGTAGTTATCAAACAGATAGATTGACTAAACCAGACATTTCTGGGTCTACTACAGTAGCTTGCATACCAGTCCAGTTAGTATTTAGTAGATTACTCGAGAAGATTAATAGGCCTCCATTGAAAACACCTAGTAATGTGGCTTTGCTGAATACTGGTGTGGATAGAAATTCATAG 2280 0.4382 MMDCGVGSIVWVRRRNGSWWPGQILGPDDLSASHLTSPRSGTPVKLLGREDASVDWYNLEKSKRVKAFRCGEFDDCIEKAESAQGGPLKKREKYARREDAILHALELEKQILKKHGRSGTRPSNTFKKGVVASPPETLGNDNENHANSFMYYESESAGGFFPPEMPKDGNTLRGEVDYSETTPRMRDLQDFGLRIAPAKKKLPSFVDPNIYQKRTVEDGARALASVGIRSGSALHINGAGQTGASRAKRSRCVYFPTESSDSLDYRETLPRVEMSPSQRRREFPYHGSMVGETEYTFMDDVESDSSETACTDSDSDSSETEPDLDEEMTIFSAFFHIILHAFTQDVPITAENGHDAEDHESTSSEELDELANSSDMPHLYPRDLITCNEAVSKWQLKGKRNNRNLVKRSIGASDGKCMTYGAGAGVEGKSSHLRHNVIDPGLHRYKFDFGDTFDDDDQNFALEDEYPLSSKSISRSQSKIHRGVAWNDLAWDDHGASKRQWDVKAHSPLYGDRYHFGGRVRPMLVNVDLKVQASYRKECVPFISLMSKLDGRAIVGHPIQVEALKDGSSDILFPSIDDFSNDGAGIEGSSVLPPAWRTARRTANFRIPRPHVPSSNGAEGAADFPTSDQEQSFEYKSLNAGSSSLQASLQKKSGLKSHRSSADKRSLKKLPKKLSLSSCQKTRTLSSLSTEHNFSRKPLHDSSSYQTDRLTKPDISGSTTVACIPVQLVFSRLLEKINRPPLKTPSNVALLNTGVDRNS* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00980 759 MobiDBLite consensus disorder prediction 115 142 - -
Lapu11g00980 759 Gene3D - 2 116 - -
Lapu11g00980 759 PANTHER T17B22.17 PROTEIN-RELATED 2 747 IPR044679 -
Lapu11g00980 759 CDD PWWP 7 83 - -
Lapu11g00980 759 MobiDBLite consensus disorder prediction 352 375 - -
Lapu11g00980 759 Pfam PWWP domain 7 87 IPR000313 -
Lapu11g00980 759 MobiDBLite consensus disorder prediction 646 712 - -
Lapu11g00980 759 MobiDBLite consensus disorder prediction 673 712 - -
Lapu11g00980 759 MobiDBLite consensus disorder prediction 301 324 - -
Lapu11g00980 759 MobiDBLite consensus disorder prediction 606 628 - -
Lapu11g00980 759 SUPERFAMILY Tudor/PWWP/MBT 5 110 - -
Lapu11g00980 759 ProSiteProfiles PWWP domain profile. 6 61 IPR000313 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00980 Lapu-Chr11 12254807 12258650 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00980 - - gmx:102667517 1158.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00980 11 12254807 12258650 Lapu11g00980 11 12254807 12258650 ECH