Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00966 ATGGATAGCCTACAAGCCACTTACAAAGACGAGGAAGATGAAGAAGAAGAGGCCACACCACCCACCACCGCCACCACCGCCGCAGCCAACGACGCCGAATCCCCAGAAGCTCCTCCCGCCACCACTAGTACGCCCTCCGACACCCCAACTGAGCCTCCCAATGACGCACGATCGGAGCCCGACCCGTCCGACGAACTCTCCGACGAAGAGGCCGCCTCCGACGGGTCCAAGAAGTCTCCGAAATCCGGCCGCGAAGAAGTAGACGCCTCCGATGAGGAGCCGCCGCCAAAGAAACAGAAGCAGCTCTCTTCTCTCACGGCGGAGGCGGCGAAGGAGGACTCGCCAGTGCCGGCAACGGCGGAAGGCGCCAACAACGCTGCGACTCCCGCGACGAACGGCTCGGCGCCGAACGCGAAGAAATCGAAGAAGAAGAACAATAACGTGTGGGCGACGAAGTCGACGCGGAAGGGGAAGAAGAAGAACAACCGCAACAACAACAACAACGGCAACAACAACAACCACGCGAACGGCGAGGACAACGTTCTGATTACGCCGGTGCCGCGGTTCCCCGACAAGAGTGACGACACGGCAGAGATGAAGATTTGTCTGTCGAAGGTGTACAAAGCGGAGAAGGTGGAATTGAGCGAGGACAGAATGAGTGCGGGGAGCACCAAGGGTTACAGAATGGTGAGGGCCACGCGCGGGGTCGTGGAAGGCGCGTGGTACTTCGAGATTAGGGTTGTGACGTTGGGGGAGAGTGGACACACGCGCCTTGGGTGGTCGACTGAGAAGGGTGATTTGCAGGCGCCGGTTGGGTACGATGGGAACAGTTTTGGGTATCGGGACATTGATGGGAGTAAGATTCACAAGGCGCTTAGGGAGAAGTATGGAGAGGAAGGGTACAGGGAAGGAGATGTTATTGGTTTCTACATCAATTTGCCTGATGGCAAAATGTATGCCCCCAATACACCGCAGTTGGTCTGGTATAAAGGCCAGCGATATGTTTGTGCTCAAGATGCTAAGGAAGATCCACCCAAAGTGGTACCTGGAAGCGAGATATCATTCTTTAAAAATGGCATATGCCAAGGTGTGGCTTTCAAGGATCTCCACGGTGGTCGTTACTATCCTGCCGCATCAATGTTTAGTCTCCCCAGTGAACCAAACTGCACGGTTAAGTTCAACTTCGGTCCTGAATTTGAATGTTTTCCCGAGGATTTCAATGAACGGCCAATTCCTAGGCCAATGATTGAAGTTCCTTATCACGGTTTTGAGAATCGAGTTGAAAATGGAGAATCTAATGAGAAGAAATCCTAG 1314 0.5426 MDSLQATYKDEEDEEEEATPPTTATTAAANDAESPEAPPATTSTPSDTPTEPPNDARSEPDPSDELSDEEAASDGSKKSPKSGREEVDASDEEPPPKKQKQLSSLTAEAAKEDSPVPATAEGANNAATPATNGSAPNAKKSKKKNNNVWATKSTRKGKKKNNRNNNNNGNNNNHANGEDNVLITPVPRFPDKSDDTAEMKICLSKVYKAEKVELSEDRMSAGSTKGYRMVRATRGVVEGAWYFEIRVVTLGESGHTRLGWSTEKGDLQAPVGYDGNSFGYRDIDGSKIHKALREKYGEEGYREGDVIGFYINLPDGKMYAPNTPQLVWYKGQRYVCAQDAKEDPPKVVPGSEISFFKNGICQGVAFKDLHGGRYYPAASMFSLPSEPNCTVKFNFGPEFECFPEDFNERPIPRPMIEVPYHGFENRVENGESNEKKS* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00966 437 CDD SPRY_Ash2 212 399 - -
Lapu11g00966 437 MobiDBLite consensus disorder prediction 20 53 - -
Lapu11g00966 437 ProSiteProfiles B30.2/SPRY domain profile. 181 400 IPR001870 -
Lapu11g00966 437 FunFam Protein TRAUCO 200 413 - -
Lapu11g00966 437 MobiDBLite consensus disorder prediction 124 152 - -
Lapu11g00966 437 SUPERFAMILY Concanavalin A-like lectins/glucanases 201 403 IPR013320 -
Lapu11g00966 437 PANTHER SET1/ASH2 HISTONE METHYLTRANSFERASE COMPLEX SUBUNIT ASH2 9 429 IPR037353 GO:0048188|GO:0051568
Lapu11g00966 437 MobiDBLite consensus disorder prediction 1 181 - -
Lapu11g00966 437 MobiDBLite consensus disorder prediction 70 98 - -
Lapu11g00966 437 Gene3D - 199 413 IPR043136 -
Lapu11g00966 437 SMART SPRY_3 238 399 IPR003877 GO:0005515
Lapu11g00966 437 Pfam SPRY domain 241 318 IPR003877 GO:0005515
Lapu11g00966 437 MobiDBLite consensus disorder prediction 163 179 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00966 K14964 - gmx:100816796 643.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00966 11 12129796 12134550 Lapu11g00966 11 12129796 12134550 ECH