Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00948 ATGATGAGAAAACATGGCTGGCAATTACCTGCTCACACTTTTCAGGTTGTTGCGATCACTGTATTTTGCTTGTTGGTGATTGCTTTCTATGCTTTCCTTGCTCCCTTCATTGGAGGTCAAATATGGGAATACATTTTCATTGGTGTTTACTCTCCTGTGGCACTCATTGTGTTTATTCTTTACGTCAGATGCACTGCAATTAACCCTGCAGATCCGGGCATCATGTCTAAGTTTGACCCTAGAGTGGGAAATAGGTTCGATTCTGCTCGTGATTTATCAGGAAAACATCACATTTCTGAACATGAACGCATTGCTGCCAGGGAGCAATATTCTCCATCATCTTCCAAAAGGTCTATGTCGAATATGAGCAAGAAAAGCTCAGTGGAAGATATGGACAGAGTGGACAATTCAAGGAAACAGAATAACCAAAGCTCGTGTAATGTAGTTGGAGGAATTTTCTGCATACTGTTTTCACATGAAGATTGCCGGAAACAGGAAGCAACAGCTGATGAGCAGGGTGGTGGTGAAGATGCTCTGTTCTGCACTTTGTGCAACGCTGAGGTGCGCAAGTTCAGCAAACATTGTAGAAGTTGTGATAAATGTGTTGATGGATTCGATCACCATTGTCGGTGGCTTAATAATTGTGTGGGTCACAAAAATTACAGTTCTTTTATTGCTCTCATGGCTTTTAGTCTTGCCTGGCTAGTCATTGAAGCTGGAGTGGGTGTTGCAGTGTTTGTGCGTTTCTTTGTCAACAAGAGAGGAATGGAATCTGAAATCATTGATAGACTTGGAAATGGATTCTCTCGTCCCCCATTTGCTGCCGTTGTGGTTGTATGTACTGTAGTTTCTATCTTGGCTTGTGTGCCTCTGGGTGAGCTTTTCTTTTTCCACATGATACTAATCAGGAAGGGCATCACTACTTATGAATATGTTGTAGCAATGAGAGCCATGAGTGAAGCACCTGCAGGGGCATCTGTAGATGAGGAATTGCCAAATATACTTTACTCTCCAACAGGCTCTGCCACAACTGGATTGAGTGGAGGAAGTTCTCTTGGTTTGCAATACAAAGGGGCTTGGTGTACCCCTCCTAGAGTATTTGTCGATTATCAGGATGAAGTTGTGCCTCACTTGGAGCCTGGAATGCTGCCGTCAACTGTTGATCCAGATGCAGCCGGAATTGCAGAAAGAGGGCAAAAGATGCCAAAAAGACCTGTTCGTATTAGTGCTTGGAAGCTTGCCAAGTTGGATTCACAAGAGGCTGTGAGAGCAGCTGCAAAAGCCAGGGCATCTTCTTCAGTTTTGCGACCTGTAGACAACCATCGCCTACCAGATGCAGAATTGAGCTCTAGTGGCAACATGAGCATCAGAAGTAGTTTGAGCACTGAGACTGGAACTAACAAGGAAATTAAACACGAGTTAAGACTGTCTCCGGTTCAAAATTCTATTGCTCCTAGTCAAGGAAGTCGTGATGAGTATGAGACTGGAACTCAAAGTATGAGTAGTTTCAGTAGTCCTAGCCATGTTCATGAGGCAGTTACACTCAGCCCTCTTCCACAGGGTCACAGTTTGGGTGGCTTCAGGTCAGGTGCCTCAATTCCTAGTTTGGTCCCTGAGCGTCCTTTAACTTCTAAAGCAGCATTGTCAAACTTCAGGAACCCAATATCTAATCCATCTCTTGGATTTGATGGGAGGACAGCAATGTCAAAAGGAATTAGCAATGATCCATTGTTGCTTTCTGCTTCTAACACTTCTATTCTAAGAGATGTGAAACGGACATCAGTTGTTTGGGATCAAGAAGCTGGCAGATATGTTTCAGTTCCTTTATTGCCATCAGAAGCCCGAAATAGGTCGTCCATGCGCATAGAACTGCCAAATGTAAATTCTGAAACAAGCAATTTTGGGAAAAAACCAGTGATTCCTCAACAGGAGTTGTCATCATCTGCACCCAAGTCTCCCGGACAGCACGTACAGAATCTGATGTATACAGGAGATTCTATCTTTTATGGAGGTCCATTTTTGAGTGCCCCTGTTAAAGATGGTTTGAAAAATGAAAGACATTTGGCATCAGGGGAGGCGCAAGATAGCATATCAGCGAACTTACCCCAAGAGCCAAGATATAAAAGGGACTCACTTTCAAATCAACTTCCTGTGTTTGTCCCTGGTGGATTTGAGAATAACCTTCAAACTCGTTCTGGCATGAATTAG 2208 0.4357 MMRKHGWQLPAHTFQVVAITVFCLLVIAFYAFLAPFIGGQIWEYIFIGVYSPVALIVFILYVRCTAINPADPGIMSKFDPRVGNRFDSARDLSGKHHISEHERIAAREQYSPSSSKRSMSNMSKKSSVEDMDRVDNSRKQNNQSSCNVVGGIFCILFSHEDCRKQEATADEQGGGEDALFCTLCNAEVRKFSKHCRSCDKCVDGFDHHCRWLNNCVGHKNYSSFIALMAFSLAWLVIEAGVGVAVFVRFFVNKRGMESEIIDRLGNGFSRPPFAAVVVVCTVVSILACVPLGELFFFHMILIRKGITTYEYVVAMRAMSEAPAGASVDEELPNILYSPTGSATTGLSGGSSLGLQYKGAWCTPPRVFVDYQDEVVPHLEPGMLPSTVDPDAAGIAERGQKMPKRPVRISAWKLAKLDSQEAVRAAAKARASSSVLRPVDNHRLPDAELSSSGNMSIRSSLSTETGTNKEIKHELRLSPVQNSIAPSQGSRDEYETGTQSMSSFSSPSHVHEAVTLSPLPQGHSLGGFRSGASIPSLVPERPLTSKAALSNFRNPISNPSLGFDGRTAMSKGISNDPLLLSASNTSILRDVKRTSVVWDQEAGRYVSVPLLPSEARNRSSMRIELPNVNSETSNFGKKPVIPQQELSSSAPKSPGQHVQNLMYTGDSIFYGGPFLSAPVKDGLKNERHLASGEAQDSISANLPQEPRYKRDSLSNQLPVFVPGGFENNLQTRSGMN* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00948 735 MobiDBLite consensus disorder prediction 428 510 - -
Lapu11g00948 735 Pfam DHHC palmitoyltransferase 178 313 IPR001594 GO:0016409
Lapu11g00948 735 MobiDBLite consensus disorder prediction 479 510 - -
Lapu11g00948 735 MobiDBLite consensus disorder prediction 108 125 - -
Lapu11g00948 735 ProSiteProfiles DHHC domain profile. 179 229 - -
Lapu11g00948 735 MobiDBLite consensus disorder prediction 712 735 - -
Lapu11g00948 735 MobiDBLite consensus disorder prediction 107 142 - -
Lapu11g00948 735 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 22 316 - -
Lapu11g00948 735 MobiDBLite consensus disorder prediction 628 657 - -
Lapu11g00948 735 MobiDBLite consensus disorder prediction 446 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00948 Lapu-Chr11 11945233 11953058 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00948 180 310 Lipid Metabolism Gene Families AT4G22750 28.244 3.97e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00948 K20027 - gmx:100814659 1303.89