Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00947 ATGAACACGCTCCTCCGATCCACTCTCAGGACTAAGAATGCTTCATCCCTAGCATATGCTGCGGTTTCCAGAAGTGTTCAGGAAAATCTTATTCAGGCTCCCTTGAGGTCTAGATCAAATAGCACGGAGTCTTCCTTGGCAAAGGATGATTCAGCTAATGAAGTGAAAAATGGTCCAGGGTTCAAAGGCCATGGTATGCTTGCTCCTTTCACGGCTGGGTGGCAGACTACTGATTTGCATCCCCTGGTTATAGAAAAGTCAGAGGGAAGCTATGTGTATGACACTAATGGGAAGAAATATCTTGACGCACTTGCTGGTTTATGGGCCACTGCTTTAGGGGGAAGTGAGCCACGCCTTATTGATGCTGCCATCGCACAATTAAAGAAGTTGCCATTTTACCATTCCTTTTGGAATCGAACCACCAGACCTTCTCTGGACCTAGCCAAGGAACTCCTAGAAATGTTCACAGCCAGAAAAATGGCAAAAGCTTTTTTTGTTAATAGTGGATCAGAAGCCAATGACACTCAGGTGAAACTTGTATGGTATTATAACAACGCGCTTGGAAGACCAGATAAGAAGAAGTTCATAGCTCGTGCTAAATCGTATCACGGTTCAACGTTGATAGCAGCCAGTCTTTCCGGCCTTCCGGCTCTGCATCAGAAATTTGATTTGCCAGCACCTTTTGTATTGCATACTGACTGTCCACATTACTGGCGGTATCATCTTCCAGGTGAGACAGAGGAAGAATTTTCAACCAGATTGGCCAACAATTTGGAGCAGCTGATTCTAAAGGAGGGACCAGAGACAATTGCTGCATTTATTGCTGAACCTGTAATGGGGGCAGGAGGTGTAATAACTCCACCATCAACTTATTTTGAGAAGGTCCAAGCTGTTGTCAAGAAGTATGACATTCTTTTTATTGCCGATGAGGTAATATGTGCCTTTGGGAGGCTTGGGACAATGTTTGGATGTGACAAATACAACATTAAGCCGGACCTGGTATCCCTGGCTAAGGCATTGTCTTCTGCATATTTGCCTATTGGAGCTGTTCTTGTAAGCCCAGAAGTTTCAGAAGTTATACACACACAGAGTAACAAACTTGGTGCATTTTCTCATGGGTTTACTTATTCTGGACACCCTGTAGCCTGTGCTGTTGCAATTGAAGCACTAAAGATCTATAAGGAAAGAAATATTGTTGACCAGGTGAACAAGATTTCCCCAAGGTTTCAAGATGGCATAAAAGCTTTTTCTGACAGTCCTATCATTGGGGAGATACGGGGAACTGGCTTGATTCTGGGCACCGAGTTCTCAGACAACAAGTCACCTAATGATCCGTTTCCTCCTGAATGGGGAGTAGGTGCCTATTTTGGAGCACAATGTGAGAAGCATGGGATGTTGGTTCGTGTAGCGGGAGATAGCATCATGATGTCTCCACCATATATTATGTCTCCAGGAGAAATTGAGGAGTTAATCAGTATTTATGGGAAAGCTTTGAAAGAAACGGAAAAGAAGGTACAGGAGCTCAAGTCTCAACGCAAGTAG 1542 0.441 MNTLLRSTLRTKNASSLAYAAVSRSVQENLIQAPLRSRSNSTESSLAKDDSANEVKNGPGFKGHGMLAPFTAGWQTTDLHPLVIEKSEGSYVYDTNGKKYLDALAGLWATALGGSEPRLIDAAIAQLKKLPFYHSFWNRTTRPSLDLAKELLEMFTARKMAKAFFVNSGSEANDTQVKLVWYYNNALGRPDKKKFIARAKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYHLPGETEEEFSTRLANNLEQLILKEGPETIAAFIAEPVMGAGGVITPPSTYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVSLAKALSSAYLPIGAVLVSPEVSEVIHTQSNKLGAFSHGFTYSGHPVACAVAIEALKIYKERNIVDQVNKISPRFQDGIKAFSDSPIIGEIRGTGLILGTEFSDNKSPNDPFPPEWGVGAYFGAQCEKHGMLVRVAGDSIMMSPPYIMSPGEIEELISIYGKALKETEKKVQELKSQRK* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00947 513 MobiDBLite consensus disorder prediction 33 48 - -
Lapu11g00947 513 CDD OAT_like 76 498 IPR005814 GO:0008483|GO:0030170
Lapu11g00947 513 Gene3D - 116 398 IPR015421 GO:0003824
Lapu11g00947 513 MobiDBLite consensus disorder prediction 33 58 - -
Lapu11g00947 513 Pfam Aminotransferase class-III 81 497 IPR005814 GO:0008483|GO:0030170
Lapu11g00947 513 FunFam Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, probable 116 396 - -
Lapu11g00947 513 ProSitePatterns Aminotransferases class-III pyridoxal-phosphate attachment site. 306 343 IPR005814 GO:0008483|GO:0030170
Lapu11g00947 513 Gene3D Aspartate Aminotransferase, domain 1 82 498 IPR015422 GO:0003824
Lapu11g00947 513 PANTHER ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE AMINOTRANSFERASE 51 500 - -
Lapu11g00947 513 Coils Coil 491 513 - -
Lapu11g00947 513 SUPERFAMILY PLP-dependent transferases 65 500 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00947 Lapu-Chr11 11930838 11939824 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00947 K16871 - gmx:100792355 971.459